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Detailed information on CNT30433872


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000418, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30567604Papaver somniferumActinidia chinensis41.2797.8793.771011forward
CNT30312261Papaver somniferumCamelina sativa41.6384.8693.921020forward
CNT30356068Papaver somniferumLactuca sativa49.8842.8292.061222forward

Expression of CNT30433872

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 2 (78 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGPSPEPLLTRRERVVACRPGDGLGTAPHGAFRVRRTVDSELVRTRGIRLFN*

>peptide 3 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 4 (40 aa)
MNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

Sequence

>CNT30433872
AATTTAAGCATATCAATAAGCGGAGGAGAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCTTGAGAATCGTACGGCT
TTGCTGTCCGAATTGTAGTCTGTAGAAGCGTCCTCAGCGACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGAGAGGGTGAGAGCCCCGTCGTGCT
CGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGCGA
GTAAAACCCGTAAGGCGCAAGGAAGCTGACTGGCGGGATCCCCTTGTGGGTTGCACCGCCGACCGACCTAGATCTTCTGTGAAGGGTTCGAGTGAGAGCA
TACTTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGATACTGACGTGCAAATCGTT
CGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCGCGGGCGAGTTC
TATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTCCAATGAGCC
GCGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCT
AACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAA
TCAACTAGCACCGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCCGGCCGTCGGGGCAATCGTTAGGCCCCGATGAGTAGGAGGGCGCTGCGGTGGC
TGCGAAACCTAGGCCGTGAGGCCGGGCGGAGCCTCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGG
AAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCGTCAGAGAGCGTGCAACACGCGAACTTCGAAAGGGAA
TCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGAAAGAGTTATCTTTTCTGTTT
AACGGCCTGCCCACCCTGGAAACGGTTCAGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACAGCGTGCAACACGCGAACTTCGAAAGGGAATCG
GGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGAAAGAGTTATCTTTTCTGTTTAAC
GGCCTGCCCACCCTGGAAACGGTTCAGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCAGGCGGCCCTTG
AAAATCCGGAGGACCGAGTGCCATCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAA
GGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGAGGTCCCAGTCCCGAACCCCTGCTCACGCGGCGAGAGC
GGGTCGTCGCGTGCCGGCCGGGGGACGGATTGGGAACGGCTCCTCACGGGGCCTTCCGCGTGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGG
AATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAAT
TCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAG
ATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAG
TCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGTCTTTGGCGGCGAAGGTGAAATACCACTACTTTTAACGTTATTTTACTTATTC
CGTGAGGCGGAAGCGGGGCATCGCCCCTCTTTTTAGATCCAAGGCTAGCTTGCTATGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGG
GGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAAC