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Detailed information on CNT30433662


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30158332Papaver somniferumPistacia vera6.8222.5591.392forward
CNT30320661Papaver somniferumAsparagus officinalis7.1243.8496.8896reverse complement
CNT30101172Papaver somniferumOryza rufipogon5.4920.1690.5474forward

Expression of CNT30433662

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MHPAKVIFLWYLVSSRIPNEQIQTRKGSF*

>peptide 2 (44 aa)
MSPDIAAMRNGVLQKLVDTASGLSRREVCKHVWTIITKFLEHLR*

>peptide 3 (53 aa)
MRSWTRHCLLFGKQNSDIEFGSGVCASSINLLTNSSSVSTALLLLTHKCSIVS*

Sequence

>CNT30433662
TTTTTCTTTCTTTTATGGTCGTTATTTATTGTGCCTTGACTTTTTTTGGATAAGTACTGATTAGCTTCCCTAGGATTTTAATTCCTACAAAGGCCTTCTT
TTGTGTCTATTTTGATGCATAATTTCCCAATTCCAACTACAACAGCTACTTCTTCACTCTCATCTCAATGCAGGATTGTCTCCGCAGGCACTTGACAGAA
TAGGGGGATTTTTTTTTGTGGATGAATGCATCCAGCTAAAGTAATTTTCCTATGGTATCTGGTATCTAGTCGGATTCCAAACGAACAAATTCAAACTCGA
AAAGGATCTTTCTGATTCTCGAAGAATGAGGGGCAAAGGGATTGATTGAGAAAGATCTCTTGTTCTTAGACTCAAAACAACGCGGACACATATCGACCTT
TAATGACCTGTGCTTGTGAACCTTACTTATGAGATCTTGGACCAGACATTGCCTGCTCTTCGGTAAGCAAAATTCAGATATAGAATTTGGGAGTGGAGTC
TGTGCAAGCAGCATCAACTTGTTGACCAATAGCTCAAGCGTCTCGACAGCACTGTTACTTTTAACACATAAGTGTAGTATAGTTTCTTGATCATTCTTTA
TGTGAATTGCATCCGACATTCCATCTTCCAGTAGTAGTTTCATGATCTCAACTCGATTTTTCATAGCTGCTAGATGTAAAGGTGTTCTTCCATCTTCATC
TTGAACTATACAAGCACCAGGTCCGGCCTTGAGCAGCAATTTCACCATCTGATGATTTTTTCTGGCTGAAGCAAGGTGAAGCAGAGTGAATCCATTTGAG
TCTACTTTCAATGCAAGCTCGGGTTTTATAGATAGGATTTTTGTTGCAAATTTTATGTCACCGGACATCGCTGCTATGCGTAACGGAGTTCTACAAAAAC
TAGTAGATACTGCATCTGGATTATCAAGACGGGAAGTATGTAAACATGTTTGGACAATAATCACCAAGTTTCTGGAACATCTCAGATAGACTGTCCTTTT
GAGAGGTGGTTAGCGCCCGCCAATGTTGAAAATTTAGCAAGAAAGTAAATTTGGCTTGGGCTTCTTAAACTAGTGGTGGTGGGACACGCCTCAGCACCCC
TGGTTCGGTTGCTGTGCTGTCTAAAAATTTATCCCACTGTGCCACAGACTTAGCATTACGAAAACGTAGACTACCAAGTTGAAGAGAGAAAATTGTGTCT
GGATCAGAAGATCTGCAAGTGAAAATGTAATTACCAGTTGTACGTACACAGTCGGTTTTTACCCAAAATCGGGAATCTGGTTTAATACAAAAACGGGTTA
ATATGGGACCAACTACCATAATAAATATACCCATTAATACGAAAACCA