Detailed information on CNT3043300


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515285Prunus dulcisJuglans regia54.7222.1985.12168forward
CNT30541074Prunus dulcisBrassica napus32.5732.6886100forward
CNT30261535Prunus dulcisBrassica rapa33.8834.2185.58104forward
CNT30612154Prunus dulcisArabis alpina47.5648.0384.93146reverse complement
CNT30652801Prunus dulcisRosa chinensis69.3869.6184.98213forward
CNT30209112Prunus dulcisHelianthus annuus24.4334.5690.6775reverse complement
CNT30155246Prunus dulcisPrunus persica99.6710097.39306forward

Expression of CNT3043300

Peptides detected in this lncRNA

>peptide 1 (41 aa)
RAQQRELVTRVGALRCWNIVPVLAGRVRVGYLLARPFQARS*

Sequence

>CNT3043300
GCCGAGCTCAGCAACGTGAGCTTGTAACCCGAGTGGGGGCTTTGAGGTGCTGGAACATTGTCCCAGTATTAGCTGGTCGGGTTCGGGTTGGCTATCTTCT
GGCTCGCCCATTCCAAGCCAGGAGTTGAGCCCTGTGGCTTGAGCGAAGGCTCTGGGTCACTGGGTTTCTAGAGTGGAGGGCACTGCGTAAGGCTGGCTTC
ACAGAGCAACGACTACCTCCCGCTATTGGCAGTGGAAGGATAACGGGTCGGTGCCACTCGGATCCGCCATGGCCTGCTAGACTGTCCCAATTGAACCAAA
ACCTTTT