« Back to Prunus dulcis search


Detailed information on CNT3043292


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 2e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729168Prunus dulcisCorchorus capsularis43.415.2281.11217forward
CNT3084441Prunus dulcisVigna radiata24.210.9185.12121forward
CNT30508399Prunus dulcisSolanum lycopersicum16.839.6284.5284forward
CNT30174654Prunus dulcisVigna angularis22.621.9484.07113forward

Expression of CNT3043292

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSYAYQFDPHTQNQQIKKCTSKVEIEKLF*

Sequence

>CNT3043292
GGAAAATTAATTGAAAGGAGGAATGATTTGGTTAAATAATTGACCTATAATTGGAGGTCATATACAGAAACATTATCATCTATGAACAATTTAGAACTGA
AGTTACACTAAGGAAGTAGTCTTCACTGCATGGAATTGTGAGACCCCCTGTAGGATGATCATATCCAAACTCTTCCTCAGCCTTGGTTAACAAGTCTTGG
AACAAAGGATGGTTCAAATATGATATTGGAATCACAAATCTCTTCTTCTTTCCTTCTCCAACATAAACAGCAAAATGGCCTTTCGGAACCTCAGCATTAG
TGTCTGCAGCTGATCCATATCTTGCTGAAAGTGTTCTCTGGAGCTTCTCCTTGGCATGAGCTATGCCTATCAATTTGATCCCCATACTCAGAATCAACAA
ATAAAGAAATGCACCTCAAAGGTTGAAATAGAAAAGTTGTTTTAGTGGTTAAGTGAGAGCTGCAGATTTTGGGTTGAATGAGCATGTCAGTACCTAAAAT