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Detailed information on CNT30432398


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 5e-82

BLAST vs NONCODE:
NONATHT001922, E-value = 8e-72

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672380Papaver somniferumSetaria viridis35.5854.4181.94432forward
CNT30521184Papaver somniferumSetaria italica35.5818.7981.71432forward
CNT30641080Papaver somniferumNymphaea colorata25.1234.0880.98305forward
CNT30549537Papaver somniferumIpomoea triloba36.8267.1284.34447forward
CNT30515028Papaver somniferumJuglans regia23.8934.1683.79290forward
CNT30698521Papaver somniferumQuercus lobata19.0341.1886.58231forward
CNT30372626Papaver somniferumArabidopsis thaliana34.2764.981.73416forward
CNT30618114Papaver somniferumSesamum indicum17.7147.5782.33215forward
CNT30266729Papaver somniferumChenopodium quinoa36.934.7682.59448forward
CNT30729048Papaver somniferumCorchorus capsularis25.6247.4183.92311forward
CNT30402686Papaver somniferumBeta vulgaris15.9832.1786.6194forward
CNT30524774Papaver somniferumPhaseolus vulgaris2948.5582.67352forward
CNT30628391Papaver somniferumVigna unguiculata35.2637.3182.24428forward
CNT30495282Papaver somniferumOlea europaea32.0422.0981.75389forward
CNT30711739Papaver somniferumGlycine max23.9724.3183.85291forward
CNT3047443Papaver somniferumPrunus dulcis28.5829.0983.29347forward
CNT30561874Papaver somniferumActinidia chinensis25.5435.1582.9310forward
CNT3086110Papaver somniferumVigna radiata25.3727.5581.49308forward
CNT3059692Papaver somniferumArabidopsis lyrata8.3234.9589.11101forward
CNT3014998Papaver somniferumZea mays13.3429.2481.48162forward
CNT30606743Papaver somniferumGossypium raimondii51.7358.881.69628forward
CNT30218287Papaver somniferumKalanchoe fedtschenkoi24.6357.6182.94299forward
CNT3066706Papaver somniferumLeersia perrieri17.2261.4779.43209forward
CNT30650282Papaver somniferumRosa chinensis33.7734.884.15410forward
CNT30626924Papaver somniferumDaucus carota21.9121.0984.21266forward
CNT30477100Papaver somniferumArabidopsis halleri8.1525.0686.8799forward
CNT30367696Papaver somniferumSorghum bicolor35.1749.6581.5427forward
CNT30620812Papaver somniferumCajanus cajan26.1925.681.45318forward
CNT30597069Papaver somniferumOryza meridionalis27.3516.5982.53332forward
CNT30570674Papaver somniferumVitis vinifera27.134.8582.98329forward
CNT3024331Papaver somniferumPopulus trichocarpa29.8234.7184.81362forward
CNT30331991Papaver somniferumDioscorea rotundata17.0543.7683.09207forward
CNT30148817Papaver somniferumBrachypodium distachyon20.4321.4580.65248forward
CNT30101941Papaver somniferumOryza rufipogon34.650.381.9420forward
CNT30496713Papaver somniferumDigitaria exilis35.5828.6980.79432forward

Expression of CNT30432398

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MHLLASPLATMLLAACLTMYAPLLSTLVGSFPEKAPPPWAPQPP*

>peptide 2 (87 aa)
MHSSITLCFFLSLGFVPLEWLDNLPCEVRVIPSEVTVSSCLQEPAVSTSLEVKVDGDHTWPEVEGFLHNLKNYLVWNFTCTICVDKH*

>peptide 3 (38 aa)
TPRHITITALYCRDFFATEQNTYSGIIEEQILLSYPLT*

>peptide 4 (97 aa)
MTLITSTNLLWPLSQMPVHTLCNVRTLLFNVHQNLTVISIKTYIVRYETDSTASITNNLLVINIGFSCNLSENHNHVCFGAGFTSNLAIRVLFKAGI*

>peptide 5 (38 aa)
MSGLCCSMFTKTLQLSASRPTSSDTKPIARQVSRTIFS*

Sequence

>CNT30432398
AGACTCCGAGACACATAACAATAACTGCCCTCTACTGTAGAGATTTCTTTGCAACAGAACAGAATACATACTCAGGGATAATAGAAGAACAAATACTTCT
TTCCTACCCCCTTACTTGACAAAAGTTCAAATCCCATTTATCTTGCTCTTTTTCCACCATAGAAAGGAAACAGAAAATCACAAAACAAAACAGAAACATA
ACTAATCATAAGTAGGTAAAAGTACAACATTTGGGCAGTTCTTCATTTTTTCCACTAGAACCAGGCAGCGGGGAAGAGATTATTATCAGGGTAGCCAACG
ACAAAGAAGTAAAGAGATTATGCACTCATCAATCACATTATGTTTCTTCCTAAGCTTGGGGTTTGTCCCACTTGAGTGGCTTGACAACCTCCCATGTGAA
GTCAGGGTCATCCCTTCCGAAGTGACCGTAAGCAGCTGTCTTCAAGAACCTGCTGTTTCCACCTCTCTTGAGGTCAAGGTGGATGGAGATCATACCTGGC
CTGAAGTCGAAGGTTTCCTTCACAATCTGAAGAATTACCTTGTCTGGAATTTTACCTGTACCATATGTGTCGACAAACACTGATAATGGCTCTGGAACAC
CAATGGCATATGATACCTGAACAATGCACCTCCTAGCAAGTCCGTTGGCAACAATGCTCTTGGCTGCCTGCCTGACGATGTATGCTCCACTCCTGTCCAC
CTTGGTTGGATCCTTTCCTGAGAAAGCACCGCCTCCGTGGGCTCCCCAACCTCCATAAGTATCAATGATGATCTTCCTGCCAGTAAGACCAGCATCAACT
CGGGAGTCTCATCTGTAGCATATCCAAACATATGACCTTGATCACCAGCACCAATCTCCTCTGGCCTCTTAGTCAAATGCCCGTGCACACCTTGTGCAAT
GTCAGGACTCTGTTGTTCAATGTTCACCAAAACCTTACAGTTATCAGCATCAAGACCTACATCGTCAGATACGAAACCGATAGCACGGCAAGTATCACGA
ACAATCTTCTCGTAATCAACATTGGCTTTAGTTGTAATCTCTCCGAAAACCATAACCATGTTTGTTTTGGTGCAGGTTTCACAAGCAACCTTGCTATCAG
GGTCCTGTTCAAGGCAGGCATCTAGTACTGCATCCGAGATCTGATCACATAGCTTGTCGGGATGTCCCTCGTTCACTGATTCGGAGGTGAATAGAAATGT
CTCCATCTTTAATA