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Detailed information on CNT30432057


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-133

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30637282Papaver somniferumCapsicum annuum80.7465.7782.011295forward
CNT3086449Papaver somniferumVigna radiata77.1278.7479.711237forward
CNT30145352Papaver somniferumMedicago truncatula81.4265.6382.311306forward

Expression of CNT30432057

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MESGFFLDVVISKSSPIFKLFTSKDQSMLIWGNSFLVLNLCFNIVNGVELSTSRVMVFPACVRETVEEKLKSVFNWKRKKEFLAKQK

>peptide 2 (31 aa)
MVSELSTSNVIVFPVRVFTKICIPPRRRRTK*

>peptide 3 (30 aa)
MVFPVRVFTNICIPPRSRSTIWRVDSFWML*

Sequence

>CNT30432057
TTAACCAAACCTCAAACCAAGCAACTGCAAATTACCAAATTAAAGTGTCAACAGATAATCAAACAGTAAACATAACATAATTTCAAAACGAGAGCTACTT
AGAAAATGAAACACAGAAATTAAATGCACACTCCTTTCTGGAGGACCTTCACAAACGCACCAACAACTTATCAATAATCACCACCACGTAGACGGAGGAC
AAGGTGAAGAGTGGATTCTTTCTGAATGTTATAATCAGCTAGATTCCTTCCATCTTCCAATCGCTTTCCTGCAAAGATCAACCTCTGCTGATCAGGTGGG
ATCCCCTCCTTATCTTGAATCTTTGCTTTCACGTTGTCAATGGTATCTGAACTCTCCACCTCTAATGTGATCGTTTTCCCAGTAAGAGTCTTCACAAAAA
TCTGCATACCACCACGTAGACGAAGAACCAAGTGAAGTGTTGACTCCTTCTGGATATTGTAATCAACCAAGGTTCTTCCATCTTCCAACTGCTTCCCTGC
AAAAATCAATCTCTGCTGGTCTGGAGGTATACCTTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATTGTGTCTGAACTTTCTACCTCCAAAGTGATA
GTCTTTCCTGTTAGAGTATTAACAAAAATCTGCATTCCTCCTCTGAGACGCAACACTAGGTGAAGGGTAGACTCCTTTTGTATATTGTAATCCGCGAGGG
TACGTCCATCTTCAAGTTATTTTCCTGCAAATATCAACCTTTGCTGGTCTGGTGGAATTTCTTCATTGTCTTGGATCTTAGCTTTCACGTTATCAATTGT
GTCAGAGCTTTCCACTTCGAGGGTGATGGTTTTGCCAGTAAGGGTCTTAACAAAAATCTGCATACCACTACGCAGACGAAGAACAAGGTGAAGTGTTGAT
TCCTTTTGAATATTATAGTCGGCAAGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAAATCAATCTCTGTTGGTCTGGAGGAATTCCTTCCTTGTCCT
AGATCTTAGCCTTCACATTGTCAATTGTATCAAGGCTTTCAACTTCAAGAGTTATGGTTTTCCCAGTAAGGGTCTTCACAAATATCTGCATACCACCACG
AAGTCGAAGTACAATATGGAGAGTTGATTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTTCCATCTTCAAGTTGTTTACCTGCAAAAATCAATCTCTGT
TGGTATGGGGGAATTCCCTCTTTGTCCTGAATCTTTTCCTTTACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGAGTGATTGTCTTTCCAGTCAAAG
TCTTAACGAAGATCTGCATACCACCACGAAGGCGTAGCACAAGATGGAGAGTGGATTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTCCCATCTTCAAG
CTGTTTACCAGCAAAGATCAGTCTATGTTGATCTGGGGGAATTCCTTCCTTGTCCTGAATCTTTGCTTTAACATTGTCAATGGTGTGGAGCTTTCGACAT
CAAGAGTAATGGTCTTCCCGGCTTGTGTTAGAGAGACGGTGGAAGAAAAATTGAAAAGCGTTTTCAATTGGAAACGGAAAAAGGAGTTTTTGGCTAAGCA
GAAA