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Detailed information on CNT30431245


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LUW0|LOX5_ARATH, E-value = 1e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071772Papaver somniferumQuercus suber31.416.3679.86293forward
CNT3095860Papaver somniferumSolanum tuberosum26.924.1878.09251forward
CNT3031620Papaver somniferumTheobroma cacao31.1966.5981.79291forward
CNT3024461Papaver somniferumPopulus trichocarpa16.0823.1182.67150forward

Expression of CNT30431245

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MNISLLERYTIGNSPASESTNSAIIRSTWIK*

>peptide 2 (87 aa)
MIELGLIKFAFWATTVHFFCPHDLRCGSLTTMLGAPYHLGSSHHWDSSKCNSHGPISRLLTKFQVRQQHTDSLRSVGAVHEVSLCLEL

>peptide 3 (52 aa)
AMATHKVYSEEVYLNLYTYLFYVNTPRKNSQILYKYWVMPIVHYCKITITPI*

Sequence

>CNT30431245
GCAATGGCGACTCACAAGGTATATTCAGAGGAAGTATATTTGAATCTATACACATATTTATTTTATGTTAACACGCCAAGAAAGAATTCACAGATACTAT
ATAAGTATTGGGTAATGCCAATTGTCCACTACTGTAAAATAACTATAACACCCATATGAACATATCCTTGTTAGAGAGATACACTATTGGGAATTCCCCG
GCCAGTGAGTCCACCAACTCTGCTATAATCAGAAGTACTTGGATAAAGTAAGGTATATGGCACCTTAACAGGCCCGTACCTATTTCGCCACATCTTATTT
TCGTTCATCTCTATTATTCTGTTTTCGATTTCAATCAGCTTATCTCCAAACTGCTTAAACGCCTCAAGTGGTGCTTTATCTGATGTCCATTCAGGAGTGT
CTCTCTGCCCTAGATAAACCTCATCTGAAGAATGCCTAGACAAGATCTCTATCAGGGATATGCCAAGTAAGGTTTGAAGCTGACTCGTGATTGTTTTCAG
AAATGCCAAGTCAGGGTTTCTCTCAAGCTCAGCATACTCGGGAGTGCCAGGCTCTGGCATGAAGCGACGGCTTATGGTTGGGCGGTTTGGGAGGAATCCC
GCATATTGATACTGACCAAAATTAACAGCTGCATGAAGAGCTGAAGCGACCCATATGATGATGGTGCATGATTGAGTTAGGTCTGATAAAGTTTGCATTT
TGGGCCACCACGGTTCATTTTTTTTGTCCCCATGACCTACGTTGCGGATCTCTGACCACCATGCTTGGAGCTCCGTATCACCTTGGATCAAGCCATCATT
GGGATAGTAGTAAGTGCAATAGTCATGGACCCATTTCTCGATTGCTGACCAAATTTCAAGTCCGTCAACAGCATACGGATAGTCTTCGATCAGTAGGCGC
AGTCCATGAGGTGAGTTTGTGTCTGGAACTGCA