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Detailed information on CNT30430817


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6WAU0|PULR_MENPI, E-value = 9e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631797Papaver somniferumVigna unguiculata12.8720.5482.8399forward

Expression of CNT30430817

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MDSHILEDSLEHLSTHILKIDIDTLRKVPKILKTDAHAKLGVGKTR*

Sequence

>CNT30430817
TAGGTGAAGTCCTTAAAGCAAAAATTTATTGAAAGAAGAAGGAAACTACAAGAGACCACAAGGACTGGACCACAGAAATTACAGCAAAACAACAAAGGAG
AAAAAGAGAAACTATTTCATGGATGATACAATTCACTACTAGGCACTTTATAAGCCGTAGGCCACTGGTGTTTTCACCATATTAACAGCAACTGCCATCT
GGTTCACATCATACTTGTCCTCGGAGTAGACCAAGGAGAAATAAATTTCACAGATGGAGTAAATCATTCATGAGAAACTTTGACTACCTGTTTACCGATG
TTTTGGCCAGTAAAAAGGCCAATTAACGCAGAAGGAGCACTCTCAAGACCTTCCACCATATCTTCAACATAAGTTAACTTTTCCTCCGTGAAATACTGCT
TCATCAGTTCCATGAACTCTGGGTAAAGGTGAAAGTGATCTGAAACATTGAACCCTTCCATACGAACACGTTTCAGGACAAGTTGTGTTAAGTTGTGAAC
CCCATCGGGTTTCTGAAGATTGTACTGTGAAATCATTCCACAAACAGGGATTCTACCATGGACAGCCATATTTTGGAGGACAGCCTCGAGCATCTTTCCA
CCCACATTCTCAAAATAGATATCGATACCCTTAGGAAAGTACCTAAAATATTGAAGACAGATGCGCACGCCAAATTAGGAGTTGGAAAAACTAGGTGATC
TGATGCTGTACAATTTGTAGTACAAGTTATAAATTCTTACGAGAGTTATATGAAACTAGAGTTTCAATT