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Detailed information on CNT30430736


BLAST search results

BLAST vs Swiss-Prot:
sp|Q08184|RBS4_MESCR, E-value = 3e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30620550Papaver somniferumCajanus cajan20.6113.4480.75161forward
CNT30725197Papaver somniferumLupinus angustifolius23.0525.582.78180forward

Expression of CNT30430736

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MILMKDPGYAALASSSSLITWEASVQPNMGSFHIVQ*

>peptide 2 (41 aa)
MGEGMRGSQTSSNQLVMSFDLRVTGNAATDFKPLKGATMLA*

>peptide 3 (47 aa)
LLLSNKLKQMNIAIIKQRKNNRIRRYYYHRCSYIHSNPIKDTNNIIR*

Sequence

>CNT30430736
TTGTTATTATCAAACAAATTAAAACAGATGAATATTGCTATTATCAAACAAAGAAAAAACAATCGGATTAGACGATATTATTATCATCGTTGCTCATACA
TACACTCGAATCCAATTAAAGATACGAATAATATAATACGCTAAAACCGAATTAGGAAACAAATTAAAAAAAAAACAAAAAATAAAAAGACACAGAAATG
AATTGGATTATGTTCCTTGATTAGCATCGCTTCATCATTTACTGTTCGTAGCTGGTGCTCTCGGGCTTGTATGCGATGAAACTAACACATTGTACTTGAC
GAACGTTGTCGAATCCGATGATTCTGATGAAAGATCCAGGGTATGCAGCCTTGGCCTCTTCTAGCTCCTTGATAACCTGGGAAGCGTCGGTACAACCGAA
CATGGGTAGCTTCCACATTGTCCAGTAACGACCATCATAGTATCCAGGGGTGTTACCGTGTTCTCTGTAGACGAATCCTCTGGCGTCGAATTCCAAACAG
GGAACCCATCCATTACGGAGAAGGTAGTCGACTTCCTTTGATAGTTGCTCGACAGTCAATGGGGGAAGGTATGAGAGGGTCTCAAACTTCTTCAAACCAG
TTGGTGATGTCATTTGATTTGCGGGTAACTGGGAATGCAGCAACGGATTTCAAGCCACTGAAGGGTGCAACCATGCTAGCTTGAGCGGGAGCGGAGCTCC
TTACAGAGGCGACTGCAGCAGAGGAAATCACTGAAGAAGCCATTTCTATTTTTTTTCTCTTTCGTATGTGAGTTTAGGGAA