Detailed information on CNT30430655


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LHJ8|SAP5_ARATH, E-value = 6e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3089988Papaver somniferumSolanum tuberosum621.2583.04112forward

Expression of CNT30430655

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MLSAEKDQLLCVFFLFGELLGVPCDALFFWRFILNLLLLGLKIDRFWGAF*

>peptide 2 (39 aa)
MKVNGSLRLICFLHLKRKNIEILLVHSDLVVKTTSSFLS*

>peptide 3 (32 aa)
MFLVAGLPEKPQLLMQSDRDPETFISVSSLSL*

>peptide 4 (61 aa)
MNLESNNLSSFNNRILTSNTLSTSSFVIKTTIMSIGISMFRTEHITAPTSKSGQSYFPPAT*

>peptide 5 (49 aa)
MKRVEDCWSKLVAANTCCRLKRTNYCVFSFCSVSCWVYHATHYFFGVLF*

>peptide 6 (88 aa)
GNRWGEERPFQDHFEMSKKPFVNLVSDNGCESFDESFSEDSDTCTDSKTSLGDLLDMLAMKCRNRNEDNESKWKSEADMLSSFEEEKH*

Sequence

>CNT30430655
GGGAATCGTTGGGGCGAGGAGAGACCATTTCAAGATCATTTCGAAATGAGTAAGAAGCCTTTTGTAAATTTGGTTTCAGATAACGGTTGTGAAAGTTTTG
ATGAATCTTTTTCGGAAGATTCTGATACTTGTACTGATTCAAAAACTTCTCTTGGTGACCTTTTGGACATGTTGGCCATGAAATGTAGGAATAGGAACGA
AGACAATGAAAGTAAATGGAAGTCTGAGGCTGATATGCTTTCTTCATTTGAAGAGGAAAAACATTGAAATTCTACTGGTGCATTCTGATCTAGTAGTGAA
AACAACTTCTTCTTTTTTAAGTTAAAAAAACTAGAAGAAGAAGTTGTATTCACTATTAGATGAGAATGCATTTGTGGGATAATGAAAGCTTGTTAGGAAA
TTGATCAGTTGACTGTTTCAATTTGGAAGAAGCTTGGAGTCTGGTTCAGCAAAAGATCATTCTAGAAGCTCTAAATTGACATCAAGATGTAACTGAGGTT
TGCCTAAATAGTCGTGAAAGAGTGTTGCATCAAGCATTCATCAGTATTGGTTGAACTGTTGGTAGTACAAAGACTATGAAAGTGGCTACACTGCTCGTTT
AAGTGTTTGGCTTCAGTCAGCTGGTCTTCCTGGAGCAATGGTGCAAATTGCAATGTTGGTTTGTTAAAGTGAAGCTTATGGATGGAGCAAGAAGCTGCTT
TGTCCTGATGCAATGGTGCAAATTGCAATGTTGGGGTTCAACCCAGTATTTTGATTGATTGCTGTTGTCAATTGGGAGAATTGCTTGTTTTCATTCAGCG
CAAGTCTTGACAAAACAAAAAACAGTTTCTCTTTGGCAATTTGCCATCCAGCAGCAGGTTGCCATGAGCAAAAAGAAAAGAAAACAAACAATTTCAAAGC
TGAGTAATTTTTATTTTTTTTTTCGCATTCATTTAAAATTTTGAATTTCAACAAGAATTTTTATTTTTGTAAATGAATTTAGAGTCTAATAATCTTAGCA
GCTTTAACAACAGGATTTTGACGAGCAATACTCTCTCTACCAGCAGCTTTGTAATCAAAACTACAATCATGTCGATCGGAATATCTATGTTCCGAACAGA
ACATATCACCGCACCGACATCTAAATCCGGTCAATCCTACTTTCCTCCGGCAACCTGAACATCGATTCACCTCCTGCTTCTTCTCAATAACCTTAATTTT
TGCCGTATCATTCTTGACTTTATCATCATCATCATCAATTTCTTTCTTATCTTGTGTAATCAGATATCGTCGTTGATAATCCGATCGCTCCGGCAACCTC
ACAAAGCGAGATCTAGCCTTTTCTTTGCCGGGAAACGTCAGAGCCGGTTGTGACACAATCCCGGTGGAAATCTTGTAACAACTTTGACACATGTTCTTGG
TAGCCGGATTACCTGAGAAACCACAATTGTTGATGCAAAGTGATAGGGATCCAGAAACCTTCATTTCTGTTTCTTCTTTATCTCTTTGAGCCATGAATTT
GAGAAATGTTTTTGCAGATTTTTGTTTTGTTTTGTTTTGGAGATGAGAAATGAGATTTTATAGTGGCGCTGGCGAGGTCGGTTTTAGAGCGTGGAGGACG
GTGATGGGATTGGGATTGGACCCCAAATGAAACGCGTAGAGGACTGTTGGTCAAAATTGGTGGCTGCTAACACATGTTGTCGGCTGAAAAGGACCAATTA
TTGTGTGTTTTCTTTTTGTTCGGTGAGTTGTTGGGTGTACCATGCGACGCACTATTTTTTTGGCGTTTTATTTTGAATCTTTTATTATTGGGGCTTAAAA
TAGATAGGTTTTGGGGGGCTTTTTAGAGTCGTGAAATAACAACTTATAGGACCCTTTATCTATATTTT