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Detailed information on CNT30430189


BLAST search results

BLAST vs Swiss-Prot:
sp|P21568|CYPH_SOLLC, E-value = 3e-84

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019668Papaver somniferumCitrullus lanatus10.425.2482.24107forward
CNT30632225Papaver somniferumVigna unguiculata9.8220.8282.18101forward
CNT30201798Papaver somniferumPisum sativum7.4833.0585.7177forward
CNT30706413Papaver somniferumPrunus avium12.5439.0984.5129forward

Expression of CNT30430189

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MDKIPGPELAMDKIPGPVCFFTKFSSANLAP*

>peptide 2 (30 aa)
MDSPPVPFPAVKSPPWHMNSGITLWKPDPL*

Sequence

>CNT30430189
CTTAAATTTTACATACACCAGTTTCATTTTTATATTTTTGATTTGATTACACCACTTCCATTTAAATCACCGCAGTAATTTGTTAACTATCAAACATTAA
CAGTAATAAGATACGATTCATAAAACCCCATATTTATTTTTTAAGACATGTAGTAGCAGTACAAGATTTTTAGCTCCATTAGAGAGGTTCAGGATAGAAA
CAACAACAACAAAATGAAACCCAAATGACGTAATTAGGGAAATATTAATAGGGAACACAAGTTGATCGTTCGATCTAACACAGCTGACCGCAGTCAGCAA
CAACAACAGGAACCTTACACTTACCACTCTGAGATCCAACTTTCTCAATAGCTCTAACAACATCCATACCTTCCACAACTTGACCAAAAACAACATGCTT
CCCATCAAGCCATTCAGTCTTATCAGTACAAATGAAAAACTGAGATCCGTTGGTCCCAGGTCCAGAGTTAGCCATGGATAAGATCCCGGGTCCAGAGTTA
GCCATGGATAAGATCCCAGGTCCAGTGTGTTTCTTCACGAAGTTTTCATCAGCAAACTTGGCACCGTAGATGGATTCCCCGCCGGTACCATTTCCAGCAG
TGAAATCACCTCCTTGGCACATGAACTCAGGAATCACTCTGTGGAAACCAGATCCTTTGTAGTGTAGAGGTTTTCCACATTTCCCCTTCCCTTTTTCTCC
TGTACAAAGAGCTCTGAAGTTCTCAGCGGTACGAGGAACAACATCGGCAAAAAGCTCCATTACGATGCGTCCACCGGGCTTTCCACCGACTGTCATGTCG
AAGTAAACCTTAGGGTTGGACATTTTCTTTCGAAGTAAAGTGAAGATGGGATTGCAAAAATGCAGTGAGTAGTAGGTAGTGAGTGAATGTAGTGAGGTTC
TGATGCCCGTTATATAGGAATTTAGGAAGAATAATGTATTTGGATCAAAGTCTTTAACTTTTTCTCTTGTTTTGAATCATGGTCGTACAAAGTTTACTCG
TGTGGATATGGATAAGTTTTGAGGTTTTG