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Detailed information on CNT30427751


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONBNAT001751, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30160120Papaver somniferumPistacia vera59.9469.8385.6868forward
CNT30541587Papaver somniferumBrassica napus59.6773.4786.69864forward
CNT30238010Papaver somniferumBrassica oleracea59.6770.5986.11864forward
CNT30310177Papaver somniferumCamelina sativa59.6774.4886.46864forward
CNT30614135Papaver somniferumArabis alpina50.7647.1287.21735forward
CNT30355521Papaver somniferumLactuca sativa49.5275.1685.22717forward

Expression of CNT30427751

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 2 (93 aa)
MMMTWEVKLAASLAGSSLELEATKPRLRSFTATFLTLNPTLSPGRASRRASWCISTDLTSVVKPVGPKVTTIPGLMTPVSTRPTGTVPIPPIL*

>peptide 3 (54 aa)
MLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKPETKMTTTEVNKTKPFCRPS*

>peptide 4 (46 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTKAIFSGLYPTFFK*

>peptide 5 (49 aa)
MVHDDDLGGEVGSFPGWVILGVGGDETTLEILHCNILDIEPNIVSWKSF*

>peptide 6 (46 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTNAIFSGLYPTFFK*

Sequence

>CNT30427751
AAAAGATACGAGTAAAAGACATTTAATAAAGAAAAAAACAAGACATTAACTAGAACACTGTTTTCATTTAACTGGGAAAGAGAGATGCAAATAAAAAGTT
GTTAACAGCAACTTACAAACCAAAATCCATAACAAGTTTTCAATTAACTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTTTGCAT
CTGGATGCTCAACAAAACAAAGGCAACAAAAGATATAAAACTGCAATGATAGCTAACCAAAGCAAACCAGAAACAAAAATGACTACTACTGAAGTAAACA
AGACAAAACCATTCTGCAGACCCTCTTAGCACCATCCCTGTACTCACTGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCGGTTG
GGTCCTTCTTCTCAACCCCCTTGATGACACCAACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGATACTGAGCGAAGGTCTC
TACAACCATGGGCTTGGTTGGAATCATCTTAATAATACCAGCATCACCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCTATCG
ATCTTGGTTTGGATCTCAGCAAACTTAACAGCAATGTGAGATGTGTGACAGTCAAGAACTGGAGCATAACCATTACCAATCTGACCAGGATGGTTCATGA
TGATGACCTGGGAGGTGAAGTTGGCAGCTTCCCTGGCTGGGTCATCCTTGGAGTTGGAGGCGACGAAACCACGCTTGAGATCCTTCACTGCAACATTCTT
GACATTGAACCCAACATTGTCTCCTGGAAGAGCTTCTAGAAGGGCTTCGTGGTGCATCTCCACAGACTTAACTTCAGTGGTCAAACCGGTGGGTCCAAAG
GTAACAACCATACCAGGCTTGATGACTCCAGTTTCAACACGTCCAACTGGCACAGTTCCAATACCTCCAATCTTGTAAACATCTTGAAGGGGAAGACGAA
GGGGCTTGTCTGAGGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTTTCAATCAT
GTTGTCTCCCTCGAATCCAGAGATAGGAACAAAGGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGATGAGACCTCCTTGACAATTTCATCG
TACCTAGCCTTTGAGTACTTGGGGGTGGGGCTTGTCTGAGGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAG
TCAAGGTTGGTGGACCTTTCAATCATGTTGTCTCCCTCGAATCCGGAGATAGGAACAAATGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAG
ATGAGACCTCCTTGACAATTTCATCGTACCTAGCCTTTGAGTACTTGG