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Detailed information on CNT30427611


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONBNAT001751, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30724026Papaver somniferumLupinus angustifolius60.5558.6186.37844forward

Expression of CNT30427611

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKPETKMTTTEVNKTKPFCRPS*

>peptide 2 (49 aa)
MVHDDDLGGEVGSFPGWVILGVGGDETTLEILHCNILDIEPNIVSWKSF*

>peptide 3 (93 aa)
MMMTWEVKLAASLAGSSLELEATKPRLRSFTATFLTLNPTLSPGRASRRASWCISTDLTSVVKPVGPKVTTIPGLMTPVSTRPTGTVPIPPIL*

>peptide 4 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 5 (29 aa)
KTFNKEKNKTLTRTLFSFNWEREMQIKSC*

>peptide 6 (46 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTKAIFSGLYPTFFK*

>peptide 7 (46 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTNAIFSGLYPTFFK*

Sequence

>CNT30427611
AAAAGACATTTAATAAAGAAAAAAACAAGACATTAACTAGAACACTGTTTTCATTTAACTGGGAAAGAGAGATGCAAATAAAAAGTTGTTAACAGCAACT
TACAAACCAAAATCCATAACAAGTTTTCAATTAACTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTTTGCATCTGGATGCTCAAC
AAAACAAAGGCAACAAAAGATATAAAACTGCAATGATAGCTAACCAAAGCAAACCAGAAACAAAAATGACTACTACTGAAGTAAACAAGACAAAACCATT
CTGCAGACCCTCTTAGCACCATCCCTGTACTCACTGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCGGTTGGGTCCTTCTTCTC
AACCCCCTTGATGACACCAACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGATACTGAGCGAAGGTCTCTACAACCATGGGC
TTGGTTGGAATCATCTTAATAATACCAGCATCACCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCTATCGATCTTGGTTTGGA
TCTCAGCAAACTTAACAGCAATGTGAGATGTGTGACAGTCAAGAACTGGAGCATAACCATTACCAATCTGACCAGGATGGTTCATGATGATGACCTGGGA
GGTGAAGTTGGCAGCTTCCCTGGCTGGGTCATCCTTGGAGTTGGAGGCGACGAAACCACGCTTGAGATCCTTCACTGCAACATTCTTGACATTGAACCCA
ACATTGTCTCCTGGAAGAGCTTCTAGAAGGGCTTCGTGGTGCATCTCCACAGACTTAACTTCAGTGGTCAAACCGGTGGGTCCAAAGGTAACAACCATAC
CAGGCTTGATGACTCCAGTTTCAACACGTCCAACTGGCACAGTTCCAATACCTCCAATCTTGTAAACATCTTGAAGGGGAAGACGAAGGGGCTTGTCTGA
GGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTTTCAATCATGTTGTCTCCCTCG
AATCCAGAGATAGGAACAAAGGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGATGAGACCTCCTTGACAATTTCATCGTACCTAGCCTTTG
AGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTTTCAATCATGTTGTCTCCCTCG
AATCCGGAGATAGGAACAAATGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGATGAGACCTCCTTGACAATTTCATCGTACCTAG