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Detailed information on CNT30427598


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONBNAT001751, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691950Papaver somniferumOryza sativa63.6755.384.73871forward
CNT30521010Papaver somniferumSetaria italica63.5279.7285.16869forward
CNT30535563Papaver somniferumEucalyptus grandis57.0295.5984.23780forward
CNT30316757Papaver somniferumCorylus avellana55.1262.9486.87754forward
CNT30546799Papaver somniferumIpomoea triloba62.6569.7985.65857forward
CNT30727590Papaver somniferumCorchorus capsularis73.6874.3985.521008forward
CNT30380230Papaver somniferumManihot esculenta63.3835.7484.08867forward
CNT30194937Papaver somniferumPisum sativum63.7487.2986.01872forward
CNT30287202Papaver somniferumTriticum aestivum33.764.1285.03461forward
CNT30387246Papaver somniferumTriticum turgidum63.5275.582.85869forward
CNT30246955Papaver somniferumAvena sativa63.5249.2485.04869forward
CNT3059230Papaver somniferumArabidopsis lyrata63.3872.1387.54867forward
CNT30598511Papaver somniferumFraxinus excelsior33.8571.1283.59463forward
CNT30449495Papaver somniferumSaccharum spontaneum63.5271.4184.35869forward
CNT30132437Papaver somniferumLolium perenne63.5272.382.28869forward
CNT3011166Papaver somniferumZea mays63.6761.684.85871forward
CNT30685098Papaver somniferumTriticum urartu37.7935.1786.27517forward
CNT30350898Papaver somniferumEragrostis tef63.5278.0186.08869forward
CNT30496874Papaver somniferumDigitaria exilis63.5277.5285.39869forward
CNT30594443Papaver somniferumEragrostis curvula63.674.9486.09870forward
CNT30603788Papaver somniferumOryza punctata63.5273.7784.12869forward

Expression of CNT30427598

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MVHDDDLGGEVGSFPGWVILGVGGDETTLEILHCNILDIEPNIVSWKSF*

>peptide 2 (54 aa)
MLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKPETKMTTTEVNKTKPFCRPS*

>peptide 3 (93 aa)
MMMTWEVKLAASLAGSSLELEATKPRLRSFTATFLTLNPTLSPGRASRRASWCISTDLTSVVKPVGPKVTTIPGLMTPVSTRPTGTVPIPPIL*

>peptide 4 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 5 (46 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTKAIFSGLYPTFFK*

Sequence

>CNT30427598
CGAGTAAAAGACATTTAATAAAGAAAAAAACAAGACATTAACTAGAACACTGTTTTCATTTAACTGGGAAAGAGAGATGCAAATAAAAAGTTGTTAACAG
CAACTTACAAACCAAAATCCATAACAAGTTTTCAATTAACTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTTTGCATCTGGATGC
TCAACAAAACAAAGGCAACAAAAGATATAAAACTGCAATGATAGCTAACCAAAGCAAACCAGAAACAAAAATGACTACTACTGAAGTAAACAAGACAAAA
CCATTCTGCAGACCCTCTTAGCACCATCCCTGTACTCACTGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCGGTTGGGTCCTTC
TTCTCAACCCCCTTGATGACACCAACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGATACTGAGCGAAGGTCTCTACAACCA
TGGGCTTGGTTGGAATCATCTTAATAATACCAGCATCACCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCTATCGATCTTGGT
TTGGATCTCAGCAAACTTAACAGCAATGTGAGATGTGTGACAGTCAAGAACTGGAGCATAACCATTACCAATCTGACCAGGATGGTTCATGATGATGACC
TGGGAGGTGAAGTTGGCAGCTTCCCTGGCTGGGTCATCCTTGGAGTTGGAGGCGACGAAACCACGCTTGAGATCCTTCACTGCAACATTCTTGACATTGA
ACCCAACATTGTCTCCTGGAAGAGCTTCTAGAAGGGCTTCGTGGTGCATCTCCACAGACTTAACTTCAGTGGTCAAACCGGTGGGTCCAAAGGTAACAAC
CATACCAGGCTTGATGACTCCAGTTTCAACACGTCCAACTGGCACAGTTCCAATACCTCCAATCTTGTAAACATCTTGAAGGGGAAGACGAAGGGGCTTG
TCTGAGGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTTTCAATCATGTTGTCTC
CCTCGAATCCAGAGATAGGAACAAAGGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGATGAGACCTCCTTGACAATTTCATCGTACCTAGC
CTTTGAGTACTTGGGGGTGGTTGGTGGACCTTTCAATCATGTTGTCTCCCTCGAATCCGGAGATAGGAACAAATGCAATTTTTTCTGGGTTGTATCCAAC
CTTCTTCAAGTAAGATGAGACCTCCTTGACAATTTCATCGTACCTAGCCTTTGAGTACTTGGGGGTGG