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Detailed information on CNT3042757

BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 7e-52

BLAST vs NONCODE:
NONGMAT001327, E-value = 5e-56

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696576	Prunus dulcis	Oryza sativa	34.98	47.01	81.6	212	forward
CNT30671259	Prunus dulcis	Setaria viridis	38.45	56.97	83.26	233	forward
CNT30523218	Prunus dulcis	Setaria italica	50.33	55.86	82.62	305	forward
CNT30317753	Prunus dulcis	Corylus avellana	49.01	42.67	86.2	297	forward
CNT30549659	Prunus dulcis	Ipomoea triloba	16.67	33.22	90.1	101	forward
CNT30703567	Prunus dulcis	Quercus lobata	45.87	55.05	84.53	278	forward
CNT30375418	Prunus dulcis	Arabidopsis thaliana	22.61	58.05	83.94	137	forward
CNT30617135	Prunus dulcis	Sesamum indicum	47.03	28.41	84.91	285	forward
CNT3069058	Prunus dulcis	Quercus suber	45.87	31.77	83.09	278	forward
CNT30197034	Prunus dulcis	Pisum sativum	31.85	23.86	85.49	193	forward
CNT30712284	Prunus dulcis	Glycine max	32.18	41.49	87.18	195	forward
CNT3092650	Prunus dulcis	Solanum tuberosum	33.5	52.86	83.25	203	forward
CNT30178072	Prunus dulcis	Secale cereale	44.55	49.82	82.59	270	forward
CNT30305698	Prunus dulcis	Triticum aestivum	47.36	52.66	82.93	287	forward
CNT30221015	Prunus dulcis	Hordeum vulgare	35.15	40.42	85.45	213	forward
CNT30386576	Prunus dulcis	Triticum turgidum	44.55	46.08	84.44	270	forward
CNT30565712	Prunus dulcis	Actinidia chinensis	26.24	53.18	82.39	159	forward
CNT3086297	Prunus dulcis	Vigna radiata	49.34	25.71	82.94	299	forward
CNT30553196	Prunus dulcis	Oryza glaberrima	34.98	37.99	82.08	212	forward
CNT30172429	Prunus dulcis	Trifolium pratense	39.77	37.25	80.91	241	forward
CNT30437818	Prunus dulcis	Aegilops tauschii	47.85	50.17	83.1	290	forward
CNT30244338	Prunus dulcis	Avena sativa	47.19	51.53	84.62	286	forward
CNT30655816	Prunus dulcis	Triticum dicoccoides	44.55	42.45	83.33	270	forward
CNT3059678	Prunus dulcis	Arabidopsis lyrata	21.62	27.23	89.31	131	forward
CNT3082467	Prunus dulcis	Brassica juncea	51.49	43.51	82.69	312	forward
CNT30261175	Prunus dulcis	Brassica rapa	40.43	51.91	83.67	245	forward
CNT30611328	Prunus dulcis	Arabis alpina	24.59	32.68	85.23	149	forward
CNT30449779	Prunus dulcis	Saccharum spontaneum	44.55	32.03	83.7	270	forward
CNT30135649	Prunus dulcis	Lolium perenne	47.36	55.95	81.88	287	forward
CNT304209	Prunus dulcis	Zea mays	32.51	33.85	83.25	197	forward
CNT30211318	Prunus dulcis	Helianthus annuus	51.65	80.46	81.47	313	forward
CNT30679651	Prunus dulcis	Triticum urartu	42.08	45.37	83.14	255	forward
CNT30720165	Prunus dulcis	Triticum spelta	16.17	20.9	84.69	98	forward
CNT30348363	Prunus dulcis	Eragrostis tef	47.03	51.17	82.81	285	forward
CNT30619612	Prunus dulcis	Cajanus cajan	37.95	54.89	86.09	230	forward
CNT30596905	Prunus dulcis	Oryza meridionalis	32.51	32.4	80.2	197	forward
CNT30357929	Prunus dulcis	Lactuca sativa	41.42	56.03	80.88	251	forward
CNT30370989	Prunus dulcis	Oryza glumipatula	44.55	43.2	81.11	270	forward
CNT30645689	Prunus dulcis	Cannabis sativa	41.91	54.86	81.1	254	forward
CNT3024855	Prunus dulcis	Populus trichocarpa	51.32	52.98	79.74	311	forward
CNT30325970	Prunus dulcis	Asparagus officinalis	48.02	42.17	83.16	291	forward
CNT30147953	Prunus dulcis	Brachypodium distachyon	47.03	32.8	81.05	285	forward
CNT30101647	Prunus dulcis	Oryza rufipogon	44.55	28.97	82.96	270	forward
CNT30577582	Prunus dulcis	Oryza barthii	32.51	30.97	80.2	197	forward
CNT30581397	Prunus dulcis	Echinochloa crusgalli	35.31	36.46	81.31	214	forward
CNT30496126	Prunus dulcis	Digitaria exilis	43.07	38.38	84.67	261	forward
CNT30117618	Prunus dulcis	Oryza nivara	34.98	47.11	82.08	212	forward
CNT3050826	Prunus dulcis	Cucumis sativus	18.15	32.26	82.73	110	forward

Expression of CNT3042757

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MRPLILFTPPLLASLRIAGLVMPWMLSLRTLRCRLAPPLPRPLPPFPRPDIFEAYGVVLQMELQRM*

>peptide 2 (35 aa)
MIVRCGNGMSRRSLFIAGAGEGVDPWVWVWMILRR*

Sequence

>CNT3042757
GAAAAGATACTAGGATTTCGAATTATAGCGAAAAGCTACAAGGCCGAATCTGGACCGTTTATATTCGATCCCTGAATTTACAAAATTAACCCCCGAATCC
GTACAAGGTCCTGCCCTGCCTCTTGAGCGCGTAGACAACATCCATGGCGGTCACCGTCTTCCTCCGAGCGTGCTCGGTGTAGGTCACGGCGTCGCGAATC
ACGTTCTCCAAGAAGATCTTGAGAACACCTCTGGTCTCTTCGTAGATGAGGCCGCTGATTCTCTTCACGCCTCCTCTTCTGGCGAGCCTTCGAATCGCAG
GCTTGGTGATGCCCTGGATGTTGTCTCTAAGGACCTTACGGTGCCGTTTAGCTCCGCCCTTGCCCAGGCCCTTGCCTCCCTTTCCACGGCCAGACATCTT
CGAAGCTTACGGCGTCGTTTTGCAGATGGAGTTACAGAGAATGTGAGATGATTGTGCGGTGTGGTAATGGGATGAGTAGGAGGAGTCTATTTATAGCGGG
AGCGGGTGAAGGCGTTGATCCTTGGGTTTGGGTTTGGATGATTTTGAGACGTTGATAAAGTGGGATCGATGGTGGGTGTTGTCTGGGAATACGCGTGGCT
TGGATC