Detailed information on CNT3042748


BLAST search results

BLAST vs Swiss-Prot:
sp|P61838|PIP11_VICFA, E-value = 1e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317557Prunus dulcisCorylus avellana22.1514.5192.1964forward
CNT30517286Prunus dulcisJuglans regia25.6113.7391.8974forward
CNT3020713Prunus dulcisCitrullus lanatus24.916.2386.1172forward
CNT30631135Prunus dulcisVigna unguiculata25.266.2291.7873forward
CNT30711465Prunus dulcisGlycine max25.2615.6393.1573forward
CNT3085870Prunus dulcisVigna radiata21.4514.1288.7162forward
CNT30176309Prunus dulcisVigna angularis24.2215.1588.5770forward

Expression of CNT3042748

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MALITTTWYKAASAAPMNVPVMGMVAKCTKNTANPIGKGAKIC*

Sequence

>CNT3042748
TCATAAACCATTAATTAACACAGAAATTTAAGACTTGGACTTGAAGGGGATGGCTCTGATCACAACCACGTGGTACAAAGCTGCAAGTGCTGCCCCAATG
AATGTTCCAGTGATGGGGATGGTAGCCAAGTGCACCAAGAACACAGCGAACCCAATAGGCAAAGGTGCCAAAATCTGTTAATCAACCCCAATAATTCAAA
TTAACAACCAATTAATCACCAATTAACAAATTAACACGATCCAGCTAGGATAAGGAAAATGATCAAACACTTAATTAGCATACATACCG