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Detailed information on CNT30427311


BLAST search results

BLAST vs Swiss-Prot:
sp|P92527|CCMC_ARATH, E-value = 2e-128

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021275Papaver somniferumCitrullus lanatus5.2160.9591.67192forward
CNT30197509Papaver somniferumPisum sativum14.1222.8596.35520forward
CNT30182368Papaver somniferumSecale cereale17.9832.6493.35662forward
CNT30299594Papaver somniferumTriticum aestivum16.2779.2393.32599forward
CNT30220987Papaver somniferumHordeum vulgare13.2322.9594.66487forward
CNT30385170Papaver somniferumTriticum turgidum17.9847.0592.9662forward
CNT30586133Papaver somniferumMusa acuminata13.3622.2589.63492forward
CNT30437984Papaver somniferumAegilops tauschii7.7775.6691.26286forward
CNT30467405Papaver somniferumSaccharum spontaneum18.0340.9693.67664forward
CNT30210175Papaver somniferumHelianthus annuus10.0598.493.78370forward
CNT30627054Papaver somniferumDaucus carota4.024187.84148forward
CNT3056795Papaver somniferumAmborella trichopoda11.6880.8391.16430forward
CNT30104639Papaver somniferumOryza rufipogon14.0146.9994.96516forward
CNT30577102Papaver somniferumOryza barthii3.4856.3989.84128forward

Expression of CNT30427311

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MVGTANSDSARISFFGSTKGELAQKLDRGQDAAGRRRLTQVPPEPREMVAYYTAH*

>peptide 2 (49 aa)
MQRDLASELGEASRASIYACILELRFLQLKRIPEKRESEDVFPERRRIE*

>peptide 3 (43 aa)
MCFKIEERRDSPPFRRRWDQGRSHFIMGLFNSNLLGDPGSSLS*

>peptide 4 (37 aa)
MLGCVSRSKKGVTLLLLGEGGTKEEVTSLWGFSTQIY*

>peptide 5 (32 aa)
MKDDRLSTQEERESHIREKVTNEVEPSNIAKA*

>peptide 6 (35 aa)
MREANPPDPTHYIMYDRQSDQSLSIVREKLLQANR*

>peptide 7 (34 aa)
MINKSTLKLTDSLGQSSECVRDTIRAQDLNSTFV*

>peptide 8 (81 aa)
CPGIHLSSIKEVGEEEVAVLKVRIFGLLTIGGPIKNPFIPDSECVKPIPRIQLITSCMIDKAISPFQSSEKSYCRPIGECS*

>peptide 9 (60 aa)
MHSRASISSVKEDSRKERIRRRVSRTKKNRVKKGELAKLDKIGMSIDTWIDVPDRLMLPG*

>peptide 10 (63 aa)
MSTEVKRASQTQKVPHIGLPQKAPVTKVKNVEKAPISVPVPEDRRKRGCFVNRKKELFIAVTR*

Sequence

>CNT30427311
AATGCCCAGGAATCCATCTTTCGTCAATCAAAGAGGTAGGTGAAGAAGAAGTGGCGGTATTGAAGGTTAGGATATTTGGTCTCCTCACCATAGGCGGCCC
AATCAAGAATCCATTCATACCGGATTCAGAATGCGTGAAGCCAATCCCCCGGATCCAACTCATTACATCATGTATGATCGACAAAGCGATCAGTCCCTTT
CAATCGTCAGAGAAAAGCTATTGCAGGCCAATCGGTGAATGCTCTTGATTGAAGGTTCCATCCATGGGTATTTAGGATAAGACCTTCATCACCCACTCAG
GCACTGGATACAGTTATTGAATATAGTGACCTATAGCACGTAGCTTTCCAGCTCCCTTGAGAACTTGGGGGATAAGGCATTCAATCTCTAAGGCCGTGAG
CTAAGTCTGCAAAGAAAGACCCGTGTCCTTTTCATAGAGTTCAATTTAAGAATGCAACACTCTCGTAGTAGCTGCATTATCTAAAGTAAGGTCCGTTTAG
CACACAGCATACCAGGTTTGACGTAGTGAATTCTGCAAATGAATCAAATTACTTCGGCCCCTATCTCGTACTTCAAGTCAATATCATAGGAATAACAAAT
CCTATCTTGGGAGTACTCTGTAGGAACCCACTGCTTGTTCCGTTGCTTGTTCCGTTAATTCTTCCCTTGCCTTCTTTTTCATGTTAATAGTTGTCAGCTT
TGGGACATGGGATTTCTTGGTAGGCTAAGACACAATCTTGATTTCGGGTAAGGGCTTGGCTTACGACGTGCTTGCGTGTTGGCTTGCTTAGACGACTTGC
TACTAGCCAATTGAAAACAGTATAGGTGAGTTCCGGGGAAAAGAGAATACTTGAGTAAGGGCTGTTAAGAGCTCCTGATGTTCTAAAGTATAAATAAAGA
TCGATGTGAAGGTCAGCAGCAGCAGGTCCAAAGACCTGAAGTTTCAAGCATCAGTCTTATCTTTCTTCCTCCAGGGTAAAGGCCCGGGGTTAAGCCCTCT
TTCAAGTTAATTTATAATAAAAAAAAGCCTCGTTGATCAGATTAAAATTAACTTGCTTTACTGGTGAACCTAGTCTACATCTGTCTTAGCTCAAGAGGGC
TTCAAAATAACTCTACCTCTAAAAAATTTTTTACAAATTTAGTGCCTTTCATTCAACTGAGGGCTCAGCCGTCGTCATTCCAAATACACGTATTCTAGCC
TCCCTGCCAAAACCCTATAGGAAGCTCCGACCAGTGTCATACTCTCATCAACCGTTAGTTCCCAGCCCAGGCACACTTCACCCAACAGATAAATTACAAA
GCTATTCTCCTCTAATTGCCATTACTTCGCCATCCCATGGACTTACAATTCAATAAACTTTAGCTGCTTAGCGCTTTTTTACGCTTCCTCGAGTGAAGTG
CCCCATAAGCTATAAGGGCGAGCCTTTATAAAAAGCGATTGAACTTACATCCTGCAGGAATCGAACCTACGAATTGCCCTGTTTCAGCCATGGATGCAAA
GAGACTTGGCGAGTGAACTAGGTGAAGCTTCTAGAGCTTCTATTTATGCATGCATTCTCGAGCTTCGATTTCTTCAGTTAAAGAGGATTCCAGAAAAGAG
AGAATCAGAAGACGTGTTTCCAGAACGAAGAAGAATAGAGTGAAGAAGGGGGAGTTAGCAAAGTTGGACAAGATTGGAATGAGCATAGATACATGGATCG
ATGTACCAGATCGGCTAATGCTACCAGGTTGATGCAATGTATTCCACCAGTTGACTGAAAACTTGATTATTGGTATATCGATCGGTCCAACACAGATTGA
AATGGAAGCCAGTTCAACAGAAAGCTTTTGAAAACGCAATGCACCCAGGTAAATAAGGAACAAGATGAGTACAGAAGTTAAACGAGCATCCCAGACCCAA
AAGGTGCCCCACATAGGTCTTCCCCAGAAAGCTCCAGTCACTAAGGTAAAGAACGTAGAAAAAGCACCTATTTCTGTACCGGTTCCAGAAGATCGAAGAA
AGAGGGGATGCTTTGTTAATAGAAAGAAGGAACTGTTTATAGCCGTCACGAGATAAACGAGTATACTCATCCAAGCCGCAGGAACATGTACATATAGAAT
ACGAGAATTTCCACCTTGTTGAAGATCTGGAGGTGCAACCCGAAGACTTAAATGAATAGCCATCGCAGTTAAGAACAATTGAAATCCAATGAGAATGTAT
GCGTAGCTTCTGGTCTTTGACATAAAGAAGGAAGGTTGTAATAACGAAAGGGACATGTTCTAACTTTGATCTAGCTAGTGGAAAGACATTCCTGTATATT
CAATCAAAAAGAAAGAAGAGAAAGAGAGTTCACTGGGAGTTAGCGCCTACGCTTGCTTGCTAACCAAGACATCCTGGCAAGCTCCGTCAGTTAGATTCTT
TACTTTACTTATTAGTATAAAAAGTACTCACTATCAAAATGAAAGACGATCGATTATCTACCCAAGAAGAGAGAGAGTCCCACATACGAGAAAAGGTCAC
AAATGAAGTTGAACCAAGTAACATTGCAAAGGCATAATGATAAACAAATCCACTTTGAAGTTGACTGATTCGCTCGGCCAATCGTCGGAATGTGTACGAG
ATACCATAAGGGCCCAAGATCTCAATAGCACCTTTGTCTAAAGCTTCGAATGAGACTTCATATCCGAAACGCAGGAAGGATCTGACTAGAAAGTCATTCA
AAACTTGATCGAAGAACCAGCGTTTATTGAAGAAGCAATAGAGTCGATTACAAAAAGTACTTGTTTGAAATGCTCGTTGGAATTGATCCGCTACGGGATT
GACATTATACGCTACAGAAGCCCCTGAAGTACTAAACGGAATAGGTATTAGTTTGGTAATGGTTGGAACAGCAAACTCAGATTCGGCAAGAATCTCATTT
TTTGGTAGTACGAAGGGGGAATTGGCCCAAAAATTGGATAGGGGTCAAGACGCAGCCGGGCGCCGTCGGCTGACTCAAGTGCCCCCCGAACCGCGCGAAA
TGGTCGCCTATTACACGGCTCACTAACTCTGCCTGGGTTGTGGGTACCTATTATTCGTCGAAAGAAAGAAAACTACATTACATAAGTCAATTCTCATTTT
GATTACATAAGACAATTCGATGCTCGGATGTGTTTCAAGATCGAAGAAAGGCGTGACTCTCCTCCTTTTAGGCGAAGGTGGGACCAAGGAAGAAGTCACT
TCATTATGGGGCTTTTCAACTCAAATTTATTAGGGGATCCCGGATCTAGCCTTAGCTAAGCCAGCCTCTACCAATTGGGACATGGGCACTGGGTGCTACG
GCCATCCCTTTTATCTTTCAATCTATTCTCATTTTGTGGAACCAAACTCTCCTGAATAGACGCCACTAATAGAAGCTGTTCTTTCTCAACATTAGATGTG
AAGGAGGCCTAATCTCTACAGAAGTTCCTAATCAGTCCCCCATACTTCGTGAGTTCAATTTCCTGATGAAGACCCACTCGCGTAATCAAACCACGAACAA
TTCAGGGTCGGAACCTATGCACGGCTAAGGAGGGGAGTTTCCGCTTACACCTTGTCTTTCTGTGGCCAGCCATATCTGGTATGTCCTTTGACAGTGGAAC
ACAGGTGCTTACGCCGCTTCTGCGGACTCCTACTTTATGAAATATATTAGATATAGCGAAACAACTGGAGCTAATCCATTCG