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Detailed information on CNT30426682


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONBNAT001751, E-value = 1e-157

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618377Papaver somniferumSesamum indicum28.97102.6883.03383forward
CNT30381152Papaver somniferumManihot esculenta41.6871.6585.48551forward
CNT30712097Papaver somniferumGlycine max31.6935.1284.49419forward
CNT30146334Papaver somniferumMedicago truncatula47.563.1888.22628forward
CNT30440472Papaver somniferumAegilops tauschii24.7454.9685.93327forward
CNT30598015Papaver somniferumFraxinus excelsior18.995088.84251forward
CNT30647369Papaver somniferumRosa chinensis30.0343.8284.63397forward
CNT30148140Papaver somniferumBrachypodium distachyon28.2998.4287.17374forward

Expression of CNT30426682

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MVHDDDLGGEVGSFPGWVILGVGGDETTLEILHCNILDIEPNIVSWKSF*

>peptide 2 (46 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTNAIFSGLYPTFFK*

>peptide 3 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 4 (54 aa)
MLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKPETKMTTTEVNKTKPFCRPS*

>peptide 5 (93 aa)
MMMTWEVKLAASLAGSSLELEATKPRLRSFTATFLTLNPTLSPGRASRRASWCISTDLTSVVKPVGPKVTTIPGLMTPVSTRPTGTVPIPPIL*

Sequence

>CNT30426682
GTAACAAAAGATACGAGTAAAAGACATTTAATAAAGAAAAAAACAAGACATTAACTAGAACACTGTTTTCATTTAACTGGGAAAGAGAGATGCAAATAAA
AAGTTGTTAACAGCAACTTACAAACCAAAATCCATAACAAGTTTTCAATTAACTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTT
TGCATCTGGATGCTCAACAAAACAAAGGCAACAAAAGATATAAAACTGCAATGATAGCTAACCAAAGCAAACCAGAAACAAAAATGACTACTACTGAAGT
AAACAAGACAAAACCATTCTGCAGACCCTCTTAGCACCATCCCTGTACTCACTGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCC
GGTTGGGTCCTTCTTCTCAACCCCCTTGATGACACCAACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGATACTGAGCGAAG
GTCTCTACAACCATGGGCTTGGTTGGAATCATCTTAATAATACCAGCATCACCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCC
TATCGATCTTGGTTTGGATCTCAGCAAACTTAACAGCAATGTGAGATGTGTGACAGTCAAGAACTGGAGCATAACCATTACCAATCTGACCAGGATGGTT
CATGATGATGACCTGGGAGGTGAAGTTGGCAGCTTCCCTGGCTGGGTCATCCTTGGAGTTGGAGGCGACGAAACCACGCTTGAGATCCTTCACTGCAACA
TTCTTGACATTGAACCCAACATTGTCTCCTGGAAGAGCTTCTAGAAGGGCTTCGTGGTGCATCTCCACAGACTTAACTTCAGTGGTCAAACCGGTGGGTC
CAAAGGTAACAACCATACCAGGCTTGATGACTCCAGTTTCAACACGTCCAACTGGCACAGTTCCAATACCTCCAATCTTGTAAACATCTTGAAGGGGAAG
ACGAAGGGGCTTGATGACTCCGGTTTCAACACGTCCAACTGGCACAGTTCCGATACCTCCAATCTTGTAAACATCCTGAAGGGGAAGACGAAGGGGCTTG
TCTGAGGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTTTCAATCATGTTGTCTC
CCTCGAATCCGGAGATAGGAACAAATGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGATGAGACCTCCTTGACAATTTCATCGTACCTAGC
CTTTGAGTACTTGGGGGTGGTG