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Detailed information on CNT30426314


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 5e-161

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-116

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30311010Papaver somniferumCamelina sativa70.6279.6782.65882forward
CNT30612915Papaver somniferumArabis alpina50.264.3784.69627forward
CNT30114931Papaver somniferumEutrema salsugineum72.7881.9783.17909forward

Expression of CNT30426314

Peptides detected in this lncRNA

>peptide 1 (34 aa)
TFYNMLPTVRTQNSSANIEILSNTELIHPCYIED*

>peptide 2 (30 aa)
MVFPVKVLTKICIPPRRRSTKWRVDSFWML*

>peptide 3 (32 aa)
MEHKGNPKRENENINIKFVQLREHKRYQIIKP*

>peptide 4 (79 aa)
MESRLLLDVVVGKSATIFQLLSGEDQTLLVWRNSFLILNLSLDVVDGVRALDFQSDGLTSQGFDKDLHTTSKTKDKMES*

>peptide 5 (85 aa)
MEGRLLLDVVVSKVRPSSNCFPAKIKRCWSGGIPSLSWILALTLSMVSELSTSKVMVFPVRVLTKICIPPLRRSTKWRVDSFWML*

>peptide 6 (40 aa)
MVSELSTSKVMVLPVKVLTKICIPPLRRRTRWRVDSFWML*

>peptide 7 (52 aa)
NILQYAPNSANSKQFCKHRNTEQHRVNTPLLYRRLNRKYHKLKTSLLKQQFI*

Sequence

>CNT30426314
AACATTTTACAATATGCTCCCAACAGTGCGAACTCAAAACAGTTCTGCAAACATAGAAATACTGAGCAACACAGAGTTAATACACCCCTGCTATATAGAA
GACTAAATAGAAAATACCATAAGCTCAAAACCAGTTTACTAAAGCAACAATTTATTTAATAACAAAAGAACCACAGACGATGATAACACTGCACTTGACT
GTTGATGCAGTGAATGGAACATAAGGGAAATCCTAAAAGAGAGAACGAAAACATTAACATAAAGTTCGTCCAACTAAGGGAACACAAACGATACCAAATC
ATCAAGCCATAGCTGAAACACCATCAACAGATACTCTAGTTACCACCACGAAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAG
CAAGAGTACGACCATCCTCCAATTGCTTTCCTGCGAAAATCAAACGTTGCTGGTCTGGAGGGATCCCTTCCTTATCTTGGATCTTGGCCTTAACATTGTC
AATAGTGTCCGAGCTCTCCACCTCAAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAGATCTGCATACCACCACGTAGACGAAGCACCAAATGGAGG
GTAGACTCCTTCTGGATGTTGTAGTCAGCAAGGTGCGACCATCTTCCAACTGCTTTCCGGCGAAAATCAAACGTTGCTGGTCTGGGGGGATACCCTCCTT
ATCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAACTCTCAACCTCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAAATCTGCATACCA
CCTCTGAGACGAAGCACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAAC
GTTGCTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACTTCCAAAGTGATGGTCTTACCAGT
CAAGGTTTTGACAAAGATTTGCATACCACCTCTAAGACGAAGGACAAGATGGAGAGTTGACTCCTTCTGGATGTTATAGTCAGCTAGAGTTCTTCCATCT
TCCAACTGCTTACCAGCGAAGATCAAACGTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTCT
CGACCTCAAGGGTAATGGTCTTACCAGTAAGTGTTTTCACAAAGATCTG