Detailed information on CNT30425744


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0ZIW2|NDHH_VITVI, E-value = 2e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269412Papaver somniferumChenopodium quinoa38.336.1191.3115forward
CNT30201824Papaver somniferumPisum sativum5430.3488.89162forward
CNT30569543Papaver somniferumActinidia chinensis98.676.1891.55296forward
CNT30262672Papaver somniferumBrassica rapa1004.1986.33300forward
CNT30689544Papaver somniferumTriticum urartu99.674.7985.62299forward
CNT30152193Papaver somniferumPrunus persica39.332.788.98118forward

Expression of CNT30425744

Peptides detected in this lncRNA

>peptide 1 (45 aa)
RNTHNDRFSEDPIVFRKLVALALINPNLLPPLHQQRLPPQRVLKK*

Sequence

>CNT30425744
CGTAACACTCATAATGATCGATTTTCCGAAGATCCCATTGTATTCCGGAAGCTCGTAGCATTGGCCCTGATAAACCCCAATTTATTGCCTCCTCTCCACC
AACAACGCCTACCCCCTCAACGCGTTCTAAAAAAATAGGATTTCGCGTAATAAGCTTTTGATATTCAGCAACCCCGGTTAAAAAATAATCGCAGAAATCT
AAACATTTATCTATCCAGCCATGAGGTAGATCAGCAGCTACTCCTCCGATACGAAAATAATTATGCATCATTCGCATACCTGTGGCAGCTTCAAATAGAT