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Detailed information on CNT30425514


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1EC66|UBQ3_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-119

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377699Papaver somniferumArabidopsis thaliana49.2480.0783.89683forward
CNT30201346Papaver somniferumPisum sativum49.1766.0983.14682forward
CNT30636126Papaver somniferumCapsicum annuum65.9749.5983.93915forward
CNT30510145Papaver somniferumSolanum lycopersicum45.2144.0386.76627forward
CNT30171101Papaver somniferumTrifolium pratense65.9755.0283.28915forward
CNT30477816Papaver somniferumArabidopsis halleri45.4277.9787.14630forward
CNT30153569Papaver somniferumPrunus persica45.3569.7386.01629forward
CNT30642981Papaver somniferumCannabis sativa62.4477.1882.56866forward
CNT30726539Papaver somniferumLupinus angustifolius49.2471.8284.33683forward

Expression of CNT30425514

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPLRRSTKWRVDSFWML*

>peptide 2 (30 aa)
MLPTVRTQNSSANIEILSNTELIHPCYIED*

>peptide 3 (32 aa)
MEHKGNPKRENENINIKFVQLREHKRYQIIKP*

>peptide 4 (30 aa)
MVFPVKVLTKICIPPRRRSTKWRVDSFWML*

>peptide 5 (48 aa)
MEGRLLLDVVVSKGATIFQLLSGKDQPLLIWRNTLLILDLSLNIIDGV*

>peptide 6 (79 aa)
MESRLLLDVVVGKSATIFQLLSGEDQTLLVWRNSFLILNLSLDVVDGVRALDFQSDGLTSQGFDKDLHTTSKTKDKMES*

>peptide 7 (40 aa)
MVSELSTSKVMVLPVKVLTKICIPPLRRRTRWRVDSFWML*

Sequence

>CNT30425514
TACTACAAAAATCTGGGGAAGCATGAAAAGAGGCTTAACTTTCGTGTTGAAAATACAAGTCTAAGGTGCACTTGAGAACATTTTACAATATGCTCCCAAC
AGTGCGAACTCAAAACAGTTCTGCAAACATAGAAATACTGAGCAACACAGAGTTAATACACCCCTGCTATATAGAAGACTAAATAGAAAATACCATAAGC
TCAAAACCAGTTTACTAAAGCAACAATTTATTTAATAACAAAAGAACCACAGACGATGATAACACTGCACTTGACTGTTGATGCAGTGAATGGAACATAA
GGGAAATCCTAAAAGAGAGAACGAAAACATTAACATAAAGTTCGTCCAACTAAGGGAACACAAACGATACCAAATCATCAAGCCATAGCTGAAACACCAT
CAACAGATACTCTAGTTACCACCACGAAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGACCATCCTCCAATT
GCTTTCCTGCGAAAATCAAACGTTGCTGGTCTGGAGGGATCCCTTCCTTATCTTGGATCTTGGCCTTAACATTGTCAATAGTGTCCGAGCTCTCCACCTC
AAGAGTGATGGTTTTTCCAGTCAAAGTCTTAACGAAGATCTGCATACCACCACGTAGACGAAGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAG
TCAGCAAGGGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGAATACCCTCCTTATCTTGGATCTTAGCCTTAACAT
TATCGATGGTGTCTGAGCTCTCCACCTCAAGAGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAAATCTGCATACCACCTCTGAGACGAAGCACCAAATG
GAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCTTCCAACTGCTTTCCGGCGAAGATCAAACGTTGCTGGTCTGGAGGAATTCCT
TCCTTATCTTGAATCTTAGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTTTTGACAAAGATTTGCA
TACCACCTCTAAGACGAAGGACAAGATGGAGAGTTGACTCCTTCTGGATGTTATAGTCAGCTAGAGTTCTTCCATCTTCCAACTGCTTACCAGCGAAGAT
CAAACGTTGTTGGTCTGGAGGAATTCCTTCCTTATCTTGAATCTTAGCCTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAGGGTAATGGTCTTA
CCAGTAAGTGTTTTCACAAAGATCTGCATCTGTTAATCAAACAAAACACAACAAGATCAGACTAACCGATCAAGAAAATCATAAAAC