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Detailed information on CNT30425316


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375121Papaver somniferumArabidopsis thaliana25.9317.180.8125forward
CNT30503775Papaver somniferumNicotiana attenuata80.7187.8181.75389forward
CNT30539234Papaver somniferumBrassica napus45.4423.9383.11219forward
CNT30143836Papaver somniferumMedicago truncatula77.3963.9884.45373forward
CNT30261302Papaver somniferumBrassica rapa41.4938.6884.5200forward
CNT30653881Papaver somniferumRosa chinensis35.8916.280.35173forward
CNT30718631Papaver somniferumMalus domestica golden45.0237.879.72217forward
CNT30580197Papaver somniferumEchinochloa crusgalli33.419.5481.37161forward
CNT3050773Papaver somniferumCucumis sativus61.4152.6783.78296forward

Expression of CNT30425316

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MIDLINFQQQWFNNIMSNHFKSRITKMMHNIFFPPCKEIINNDNTIPPFHQSIN*

Sequence

>CNT30425316
ACCAATTGGATTGACATTTCCCCAGTAAGTTTCAACTTGAGGATGCTGTAGAGGATCACCATAAACTTCACTAGTACTTGTCAACAAAAATCTAGCACCA
ACTCTTTTAGCTAACCCCAGCATATTCAGTGTTCCAACTACATTTGATATGATAGTCTTGACAGGATTGAATTTGTAATGAACAGGAGAAGCAGGACAAG
CTAAATGATAGATCTGATCAACTTCCAACAACAATGGTTCAACAACATCATGTCTAATCATTTCAAATCTAGGATTACCAAAATGATGCATAACATTTTC
TTTCCTCCCTGTAAAGAAATTATCAACAACGATAACACTATCCCCCCTTTCCATCAATCTATCAACTAGATGACTACCAACAAATCCAGCACCACCAGTA
ACAACAATCCTCAACCCTTTCCTTCTCAAACCTAACGGAATTTTCCCACCTGAATTTACAGATCTTTGCTCGTAAACAAATT