Detailed information on CNT30424816


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500372Papaver somniferumCoffea canephora66.7782.8890.41886forward
CNT30619071Papaver somniferumSesamum indicum59.23101.0390.59786forward
CNT30283133Papaver somniferumChenopodium quinoa52.985.6190.88702forward
CNT3089447Papaver somniferumVigna radiata62.0977.389.08824forward
CNT30726571Papaver somniferumLupinus angustifolius46.3570.9391.71615forward

Expression of CNT30424816

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MQPKAGGKFRPRLNTGERPITNKYREGKMKRTLKRESKSA*

>peptide 2 (33 aa)
MCPGRMRNGDEPVRRSTRGADRRGLRRRPKPGL*

>peptide 3 (52 aa)
MCASPRASKTRKRKEADWRDPLVGCTADRPRSSVKGSSESIPVGTRKMVNYA*

>peptide 4 (43 aa)
MAPTLRPQVKRDYPLNLSISISGGEETYKDSPSNGERTGNSPA*

>peptide 5 (85 aa)
RNPIFERLSATDISALASMKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHACLGITHRVSPSNSCPWRLLATLALGSEWGGH*

>peptide 6 (80 aa)
MPAETSSPRSWWAARASRRASGNSVLPASACGFPIRPVLKHGPRSLTCVRVHGRVKPVSARKLTGGIPLWVAPPTDLDLL*

Sequence

>CNT30424816
CGAAATCCTATCTTCGAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATC
CCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGTCCCAAGCCTTCGGGCCGAGGGCACGCTTGCCTGGGCATCACGCACCGAGTCTCCCCCTCCAACTC
ATGTCCTTGGCGCCTTCTGGCGACATTGGCATTGGGCAGTGAATGGGGAGGACATTGACCCCCCGTGCCTTTAAAGTGCGGTCGGTCTAAACACAGGCCC
TGGGAGGCCAGCGTCACGATTCGTGGTGGTCGACACTCGTTGTCTCTCTTCATTCCTGAATCCGTGTCTGCTGTGCTTACCGTGAAGGACCATAAGGAAC
CCATCGGGTCATAAATATGGCACCCACTCTGCGACCCCAGGTCAAGCGGGACTACCCGCTGAATTTAAGCATATCAATAAGCGGAGGAGAAGAAACTTAC
AAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCTTGAGAATCGGACGGCACCGCTGTCCGAATTGTAGTCTGTAGAAGCGTCCTCAGCG
ACGGACCGGGCCCAAGTCCCCTGGAAAGGGGCGCCTGAGAGGGTGAGAGCCCCGTCGTGCTCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGG
GTTGTTTGGGAATGCAGCCCAAAGCGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGCGAGAGACCGATAACGAACAAGTACCGCGAGGGAAAGATGAA
AAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGCCCCGGTCGGATGCGGAACGGTGATGAG
CCGGTCCGCCGATCGACTCGGGGTGCGGACCGACGCGGATTGAGGCGGCGTCCCAAGCCCGGGCTGTAGTCATGCCCGCGGAGACGTCGTCGCCTCGATC
GTGGTGGGCAGCACGCGCCTCACGGCGTGCCTCCGGCAACAGCGTGCTCCCGGCGTCGGCCTGTGGGTTCCCCATTCGGCCCGTCTTGAAACACGGACCA
AGGAGTCTGACATGTGTGCGAGTCCACGGGCGAGTAAAACCCGTAAGCGCAAGGAAGCTGACTGGCGGGATCCCCTTGTGGGTTGCACCGCCGACCGACC
TAGATCTTCTGTGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGG
AGGCTCGCAGCGATACTGACGTGCAAA