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Detailed information on CNT30424667


BLAST search results

BLAST vs Swiss-Prot:
sp|P27495|CB24_TOBAC, E-value = 5e-154

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525395Papaver somniferumPhaseolus vulgaris74.6460.6579.77618forward

Expression of CNT30424667

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPLGPLQVPRGQNYHQGTEGRRFHLVDRQLLYIPQQHP*

>peptide 2 (60 aa)
MENIASRPFFSSFTFSSANASGSSASPKGSKLPPGYRGSTISPGGPPATLYPSTAPIRIT*

>peptide 3 (36 aa)
HGVRKVVCEVLKRTFSSYNCLNEETKHGEHSKSPIL*

>peptide 4 (29 aa)
RGQKGGLRGSQEDLFQLQLPERRNQTWRT*

>peptide 5 (30 aa)
MMGMRETWMPFICFVKENIRRLLKKVFWWCC

Sequence

>CNT30424667
CACGGGGTCAGAAAGGTGGTCTGCGAGGTTCTCAAGAGGACCTTTTCCAGTTACAATTGCCTGAACGAAGAAACCAAACATGGAGAACATAGCAAGTCGC
CCATTCTTTAGTTCCTTTACCTTTAGCTCAGCAAATGCCTCTGGGTCCTCTGCAAGTCCCAAGGGGTCAAAACTACCACCAGGGTACAGAGGGTCGACGA
TTTCACCTGGTGGACCGCCAGCTACTCTATATCCCTCAACAGCACCCATAAGGATAACTTGAGTGGCCCAAATCGCCAAGATGCTCTGAGCATGAACTAA
GCTGGAGTTTCCCAAGTAGTCAAGTCCACCTTCACTGAAAATCTGAGAACCAGCTTTGAACCAAACAGCTTCGCCGAATTTAACTCCGTTTTTAGATAGA
AGTTCAGGGAATACACAACCCAAAGCTCCGAGCATGGCCCACCTTGAATGAATCACCTCAAGTTCCCGGTTTTTGGCAAAGGTCTCTGGGTCTGCGGATA
ATCCAGCAGTATCCCAGCCATAATCACCAGGGAATTCACCAGTTAGGTATGATGGGGACTCACCAGAGAAGGGTCCAAGGTACTTGACACGGTCTGGACC
ATACCATGGACTTGCTGAAGAAGCAGCAGGCTTCTTTGCTGATGTTTTCCTCATCACAATCATTCCATTGCTACTGGATCTAACATTGGTTGGGAATTTC
GATTGTGCGTTCAAAGTTACAGCTGTGCCTGCAAATGATGGGGATGAGAGAGACATGGATGCCATTTATATGTTTTGTTAAAGAGAATATCAGAAGACTG
CTGAAGAAGGTATTTTGGTGGTGTTGTT