Detailed information on CNT30424546


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 3e-149

BLAST vs NONCODE:
NONBNAT001751, E-value = 4e-166

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672814Papaver somniferumSetaria viridis72.2380.0284.64853forward
CNT30520996Papaver somniferumSetaria italica71.5567.8284.97845forward
CNT30639730Papaver somniferumNymphaea colorata45.4758.4383.8537forward
CNT30377782Papaver somniferumArabidopsis thaliana72.0684.2685.9851forward
CNT30274113Papaver somniferumChenopodium quinoa50.2195.0386593forward
CNT30629525Papaver somniferumVigna unguiculata31.4186.2886.25371forward
CNT30127375Papaver somniferumCorymbia citriodora44.3793.9185.31524forward
CNT30624959Papaver somniferumDaucus carota28.7910085.29340forward
CNT30151899Papaver somniferumPrunus persica41.4944.4286.12490forward
CNT30723969Papaver somniferumLupinus angustifolius65.8872.185.6778forward

Expression of CNT30424546

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MMMTWEVKLAASLAGSSLELEATKPRLRSFTATFLTLNPTLSPGRASRRASWCISTDLTSVVKPVGPKVTTIPGLMTPVSTRPTGTVPIPPIL*

>peptide 2 (40 aa)
MLSRASRRVGGPFNHVISLESRDRNEGNFFWVVSNLLQVR*

>peptide 3 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 4 (45 aa)
MVSLAQRCCQEPQGELVDLSIMLSPSNPEIGTKAIFSGLYPTFFK*

>peptide 5 (49 aa)
MVHDDDLGGEVGSFPGRIVLGVGGDETTLEILHCNILDIEPNIVSWKSF*

>peptide 6 (54 aa)
MLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKQETKMTTTEVNKTKPFCRPS*

Sequence

>CNT30424546
TGATGAGAAAACATTTCTGCAGACACTATTTTCATTAAACTGGGAAAGAGATACGCAAATAAAAAGTTGTTAACAGCAACTTACAAACCAAAATCCATAA
CAAGTTTTCAATTAACTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTTTGCATCTGGATGCTCAACAAAACAAAGGCAACAAAAG
ATATAAAACTGCAATGATAGCTAACCAAAGCAAACAAGAAACAAAAATGACTACTACTGAAGTAAACAAGACAAAACCCTTCTGCAGACCCTCTTAGCAC
CATCCCTGTACTTACTGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCTGTTGGATCCTTCTTCTCAACTCCCTTGATGACACCA
ACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGGTACTGAGCGAAGGTTTCTACAACCATGGGCTTGGTTGGAATCATCTTAA
TAATACCAGCATCACCGTTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCTATCTATCTTGGTTTGGATCTCAGCAAACTTAACAGC
AATGTGAGATGTGTGACAGTCAAGAACTGGAGCATAACCATTACCGATCTGACCAGGATGGTTCATGATGATGACCTGGGAGGTGAAGTTGGCAGCTTCC
CTGGCAGGATCGTCCTTGGAGTTGGAGGCGACGAAACCACGCTTGAGATCCTTCACTGCAACATTCTTGACATTGAACCCAACATTGTCTCCTGGAAGAG
CTTCTAGAAGGGCTTCGTGGTGCATCTCCACAGACTTAACTTCAGTGGTCAAACCGGTGGGTCCAAAAGTAACAACCATACCAGGCTTGATGACTCCAGT
TTCAACACGTCCCACTGGCACAGTTCCAATACCTCCAATCTTGTAAACATCCTGAAGGGGAAGACGAAGGGGCTTGTCTGATGGTCTCTTTGGCTCAGAG
ATGTTGTCAAGAGCCTCAAGGAGAGTTGGTGGACCTTTCAATCATGTTATCTCCCTCGAATCCAGAGATAGGAACGAAGGCAATTTTTTCTGGGTTGTAT
CCAACCTTCTTCAAGTAAGATGAGACCTCCTTCACAATTTCATCGTACCTGGCCTTTGAGTACTTGGGGGTGGTGGCATCC