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Detailed information on CNT30423983


BLAST search results

BLAST vs Swiss-Prot:
sp|P34823|EF1A2_DAUCA, E-value = 1e-54

BLAST vs NONCODE:
NONCQUT008675, E-value = 3e-70

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629687Papaver somniferumVigna unguiculata54.7122.3386.85441forward
CNT30176058Papaver somniferumVigna angularis56.8250.7285.37458forward
CNT3039699Papaver somniferumMarchantia polymorpha31.6429.9683.92255forward

Expression of CNT30423983

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKQETKMTTTEVNKTKPFCRPS*

>peptide 2 (46 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTKAIFSGLYPTFFK*

>peptide 3 (39 aa)
MGLVGIILIIPASPFFKNLGLMTPVSTRPTGTVPIPPIL*

>peptide 4 (37 aa)
MVSLAQRCCQEPQGELVPCTSQGWWTFQSCYLPRIQR*

Sequence

>CNT30423983
AAAAGATATGATGAGAAAACATTTCTGCAGACACTATTTTCATTAAACTGGGAAAGAGATACGCAAATAAAAAGTTGTTAACAGCAACTTACAAACCAAA
ATCCATAACAAGTTTTCAATTAACTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTTTGCATCTGGATGCTCAACAAAACAAAGGC
AACAAAAGATATAAAACTGCAATGATAGCTAACCAAAGCAAACAAGAAACAAAAATGACTACTACTGAAGTAAACAAGACAAAACCCTTCTGCAGACCCT
CTTAGCACCATCCCTGTACTTACTGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCTGTTGGATCCTTCTTCTCAACTCCCTTGA
TGACACCAACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGGTACTGAGCGAAGGTTTCTACAACCATGGGCTTGGTTGGAAT
CATCTTAATAATACCAGCATCACCGTTCTTCAAGAACTTGGGCTTGATGACTCCAGTTTCAACACGTCCCACTGGCACAGTTCCAATACCTCCAATCTTG
TAAACATCCTGAAGGGGAAGACGAAGGGGCTTGTCTGATGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGT
CAAGGTTGGTGGACCTTTCAATCATGTTATCTCCCTCGAATCCAGAGATAGGAACGAAGGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGA
TGAGAC