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Detailed information on CNT30423884


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 1e-73

BLAST vs NONCODE:
NONGMAT001703, E-value = 4e-73

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30503993Papaver somniferumNicotiana attenuata29.7988.7386.89244forward
CNT30637620Papaver somniferumCapsicum annuum32.613.9186.14267forward

Expression of CNT30423884

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MMMTWEVKLAASLAGSSFEGRRRGLSEGLFGSEMLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTKAIFSGLYPTFFK*

>peptide 2 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 3 (47 aa)
PPVEHPGLQLNAQLNEGETKQKTTLVPNAPQQKTKLTNSKEISPSCS*

Sequence

>CNT30423884
ACCGCCTGTCGAGCACCCAGGTTTGCAACTGAATGCGCAACTGAACGAAGGTGAAACAAAACAAAAGACCACACTGGTACCTAATGCACCACAACAAAAA
ACAAAACTGACTAATAGTAAAGAAATAAGTCCCTCCTGTAGTTAACCTTGGCAGCACACTTCATTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCT
GTTGGGTCCTTCTTCTCAACTCCCTTGATGACACCAACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGGTACTGAGCAAAGG
TCTCTACAACCATGGGCTTGGTTGGAATCATCTTAATAATACCAGCATCACCGTTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCT
ATCGATCTTGGTTTGGATCTCAGCAAACTTGACAGCAATGTGAGATGTGTGACAGTCAAGAACTGGAGCATAACCATTACCAATCTGACCAGGATGGTTC
ATGATGATGACCTGGGAGGTGAAGTTGGCAGCTTCCCTGGCAGGGTCATCCTTTGAGGGAAGACGAAGGGGCTTGTCTGAGGGTCTCTTTGGCTCAGAGA
TGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTTTCAATCATGTTGTCTCCCTCAAATCCAGAGATAGGAACAAA
GGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGATGAGACCTCCTTGACAATTTCATCATACCTAGCCTTTGAGTACTTGGGGGTGGTGGCA
TCCATCTACAAACACAAAC