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Detailed information on CNT30423866


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH32|UBQ4_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-170

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701438Papaver somniferumQuercus lobata84.9174.4382.041086forward
CNT30272606Papaver somniferumChenopodium quinoa88.7455.3782.731135forward
CNT3019984Papaver somniferumCitrullus lanatus71.3160.1282.35912forward
CNT30727227Papaver somniferumCorchorus capsularis51.657.4484.85660forward
CNT30379426Papaver somniferumManihot esculenta70.9178.3283.02907forward
CNT30525141Papaver somniferumPhaseolus vulgaris75.0655.4683.12960forward
CNT30629220Papaver somniferumVigna unguiculata70.5283.5283.15902forward
CNT30709517Papaver somniferumGlycine max70.5297.0982.48902forward
CNT30636316Papaver somniferumCapsicum annuum88.6654.782.721134forward
CNT3094992Papaver somniferumSolanum tuberosum68.267584.42873forward
CNT3086353Papaver somniferumVigna radiata70.5242.0982.93902forward
CNT30238962Papaver somniferumBrassica oleracea70.0546.3582.59896forward
CNT30172216Papaver somniferumTrifolium pratense69.3552.0582.64887forward
CNT30311185Papaver somniferumCamelina sativa87.8884.8983.451124forward
CNT3061767Papaver somniferumArabidopsis lyrata71.2355.7982.66911forward
CNT30605652Papaver somniferumGossypium raimondii71.3192.4982.35912forward
CNT30622816Papaver somniferumDaucus carota86.7959.0482.791110forward
CNT30359535Papaver somniferumLactuca sativa70.9953.7681.94908forward
CNT30704854Papaver somniferumPrunus avium86.3261.9284.151104forward
CNT3028051Papaver somniferumTheobroma cacao85.7789.9982.591097forward
CNT3026527Papaver somniferumPopulus trichocarpa69.4390.8983.67888forward
CNT30726149Papaver somniferumLupinus angustifolius69.3546.5983.2887forward
CNT3051129Papaver somniferumCucumis sativus66.1595.5984.16846forward

Expression of CNT30423866

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MPSLSWIFAFTLSIVSELSTSNVIVFPVKVFTKICIPPRRRKTR*

Sequence

>CNT30423866
TAGCACACGAAACACCCACAAATAAACATAACACTGAAGTCTGAACTATCTTTTGCAGACCAACTTAAAAGAGAACACACCATCAAGAGCAACTTCTGAT
TACCAGTACCAAATGGGAGGACACCATCACAAAGAACTTCTAGTTACCACCACGGAGACGAAGGACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAA
TCCGCAAGAGTTCGACCATCCTCCAGCTGCTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACAT
TATCAATTGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTTTTTCCAGTCAAGGTCTTCACAAATATCTGCATACCACCACGTAGACGCAAGACAAGGTG
AAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTACGACCGTCTTCCAATTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGTGGGATGCCT
TCTTTGTCTTGGATCTTCGCCTTCACATTGTCAATAGTATCTGAACTTTCCACCTCCAACGTGATAGTCTTTCCTGTCAAAGTCTTCACAAAAATCTGCA
TACCACCACGAAGACGCAAGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGCCCGTCTTCCAATTGCTTTCCAGCGAAGAT
CAACCTCTGTTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTAGCTTTAACATTATCAATAGTGTCTGAACTTTCAACCTCCAAGGTGATAGTCTTG
CCAGTTAGGGTCTTCACAAAGATCTGCATACCACCTCTGAGACGAAGAACCAAGTGGAGAGTGGACTCTTTCTGGATGTTGTAGTCAGCAAGGGTACGTC
CATCTTCCAACTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTTGCCTTGACATTATCGATTGTGTCGGA
GCTCTCAACTTCCAAAGTGATGGTCTTGCCAGTTAGGGTCTTAACAAAGATTTGCATACCACCTCTGAGACGAAGAACCAAGTGAAGAGTAGACTCTTTC
TGGATGTTATAGTCAGCCAGAGTCCTTCCATCTTCCAACTGTTTACCAGCAAAAATCAAACGTTGCTGGTCTGGGGGAATCCCTTCCTTATCTTGAATCT
TAGCCTTAACATTGTCAATGGTGTCCGAGCTCTCTACCTCTAGGGTGATTGTTTTGCCAGTCAGAGTTTTGACAAAGAT