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Detailed information on CNT30423787


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41803|EF1A_MAIZE, E-value = 0.0

BLAST vs NONCODE:
NONCQUT004692, E-value = 1e-114

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546688Papaver somniferumIpomoea triloba23.0399.7788.11429forward
CNT30727591Papaver somniferumCorchorus capsularis24.9117.1989.66464forward
CNT30380125Papaver somniferumManihot esculenta24.9638.7889.25465forward
CNT30195181Papaver somniferumPisum sativum24.1594.9490.22450forward
CNT30160107Papaver somniferumPistacia vera23.497.5489.22436forward
CNT3093993Papaver somniferumSolanum tuberosum25.1789.8588.49469forward
CNT30288144Papaver somniferumTriticum aestivum17.9890.5486.87335forward
CNT30224132Papaver somniferumHordeum vulgare20.995786.19391forward
CNT30386294Papaver somniferumTriticum turgidum17.9891.0386.87335forward
CNT30440628Papaver somniferumAegilops tauschii19.4349.3285.36362forward
CNT30658093Papaver somniferumTriticum dicoccoides17.9876.6686.87335forward
CNT30608684Papaver somniferumGossypium raimondii21.8596.6789.19407forward
CNT3067093Papaver somniferumLeersia perrieri14.1258.8488.59263forward
CNT30646927Papaver somniferumRosa chinensis17.0294.3588.96317forward
CNT30689637Papaver somniferumTriticum urartu25.1247.9586.75468forward
CNT30721807Papaver somniferumTriticum spelta12.7826.4789.08238forward
CNT30338600Papaver somniferumEragrostis tef23.9492.9287.22446forward
CNT30480842Papaver somniferumArabidopsis halleri14.9257.0889.57278forward
CNT30570869Papaver somniferumVitis vinifera17.8710087.09333forward
CNT30645139Papaver somniferumCannabis sativa12.6185.1492.77235forward
CNT30120974Papaver somniferumCitrus clementina24.9176.5790.09464forward
CNT30101083Papaver somniferumOryza rufipogon24.184.0887.53449forward
CNT30116334Papaver somniferumOryza nivara22.927087.59427forward
CNT30726413Papaver somniferumLupinus angustifolius24.896.8689.61462forward

Expression of CNT30423787

Peptides detected in this lncRNA

>peptide 1 (31 aa)
YNSEDNKYQIRYSINRVKSLELKTQNQTYVF*

>peptide 2 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 3 (44 aa)
MVIPRSRSALSLSRTHAYLNDLLFISAASFSNLSITRLSIPPSL*

>peptide 4 (37 aa)
MVHDDDLGGEVGSFPGRVILHCNILDIEPNIVSWKSF*

>peptide 5 (42 aa)
MSRSINNCAVVLGGLKLPQGNINGNTTLTFSLKLVKNPCVLE*

>peptide 6 (81 aa)
MMMTWEVKLAASLAGSSFTATFLTLNPTLSPGRASRRASWCISTDLTSVVKPVGPKVTTIPGLMTPVSTRPTGTVPIPPIL*

>peptide 7 (46 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTKAIFSGLYPTFFK*

>peptide 8 (49 aa)
MFFKELQLNSLTFCCHRLSSTQVCIRTRNKTKAIQNKRLHRYLTNKKQK*

Sequence

>CNT30423787
GGTACAACTCTGAAGACAATAAATACCAAATACGATATTCAATTAACAGAGTAAAAAGTCTTGAATTGAAAACCCAAAATCAAACATATGTTTTTTAAGG
AACTTCAACTGAACAGCCTAACATTTTGTTGCCACCGCCTGTCAAGCACCCAGGTTTGCATCCGGACGCGCAACAAAACAAAAGCTATACAAAACAAGAG
ACTGCACAGATACCTAACCAACAAAAAGCAAAAATAAAACTGACTAATAGTAAAGCAATAGAGACAAGTCCTTCCTGTAGATCCTCCTAGCACCATCCCT
CTAGTTAACAATGGCAGCACACTTCATTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCTGTTGGGTCCTTCTTCTCAACTCCCTTGATGACACCAA
CAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGGTACTGAGCAAAGGTCTCTACAACCATGGGCTTGGTTGGAATCATCTTAAT
AATACCAGCATCACCGTTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCTATCGATCTTGGTTTGGATCTCAGCAAACTTGACAGCA
ATGTGAGATGTGTGACAGTCAAGAACTGGAGCATAACCATTACCGATCTGACCAGGATGGTTCATGATGATGACCTGGGAGGTGAAGTTGGCAGCTTCCC
TGGCAGGGTCATCCTTCACTGCAACATTCTTGACATTGAACCCAACATTGTCTCCTGGAAGAGCTTCTAGAAGGGCTTCGTGGTGCATCTCCACAGACTT
AACTTCAGTGGTCAAACCGGTGGGTCCAAAAGTAACAACCATACCAGGCTTGATGACTCCAGTTTCAACACGTCCCACTGGCACAGTTCCAATACCTCCA
ATCTTGTAAACATCCTGAAGGGGAAGACGAAGGGGCTTGATGACTCCAGTTTCAACACGTCCCACTGGCACAGTTCCAATACCTCCAATCTTGTAAACAT
CCTGAAGGGGAAGACGAAGGGGCTTGTCTGAGGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGTCAAGGTT
GGTGGACCTTTCAATCATGTTGTCTCCCTCAAATCCAGAGATAGGAACAAAGGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGATGAGACC
TCCTTGACAATTTCATCATACCTAGCCTTTGAGTACTTGGGGGTGGTGGCATCCATCTACAAACACAAACACAAAACAAGATATAATAGTCAGCTACAGG
AAGGATAAACAGGCTTATATTACAACATTAGAAAGTTTAAATTTCATAAACAGGAAAAGAACAGTGAGAAAGGTATACCTTGTTACAACAACAGATCATC
TGCTTGACACCAAGGGTGAAAGCAAGAAGAGCGTGCTCACGAGTCTGACCATCCTTTGAGATACCAGCCTCAAAACCTCCAGTGGTAGAATCGATAATGA
GGACGGCACAATCAGCCTGAGAAGTACCAGTGATCATGTTTTTGATAAAGTCACGATGTCCAGGAGCATCAATAACTGTGCAGTAGTACTTGGTGGTCTC
AAACTTCCACAAGGCAATATCAATGGTAATACCACGCTCACGTTCAGCCTTAAGCTTGTCAAGAACCCATGCGTACTTGAATGACCTCTTGTTCATCTCA
GCAGCCTCCTTCTCGAATCTTTCAATAACACGCTTGTCAATACCTCCAAGCTTGTAGATCAAGTGACCGGTGGTGGTCGATTTTCCAGAGTCGACATGTC
CAATGACGACAATGTTGATGTGAACCTTCTCTTTACCCATATTGAATTCTTAGAAAATAACTG