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Detailed information on CNT30423726


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT001209, E-value = 8e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373597Papaver somniferumArabidopsis thaliana16.4336.0182.14224forward
CNT30708635Papaver somniferumGlycine max16.3639.1980.72223forward
CNT30619934Papaver somniferumCajanus cajan10.0526.6581.75137forward
CNT30570838Papaver somniferumVitis vinifera13.7944.6680.85188forward
CNT3031788Papaver somniferumTheobroma cacao13.5725.8481.08185forward
CNT30331344Papaver somniferumDioscorea rotundata10.2720.6282.14140forward

Expression of CNT30423726

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MDAPSKAPPAKMLAPTMKPMARGAIVPKLPFFGSMAVAYTVYTRPNVITISNTKAFQTVTPDDNAKADVTCREKTTQHTSAKFQLH*

Sequence

>CNT30423726
AATCGAAAAAATTACCAACTAAACACGATATATGAGACATGAATGAAGCACAAGATTAAATTTCAAGGGATTAAACACAAATGGCTCACATCACATACAT
GATCATCACGAAGCTTGAAACGAAAAGCGACGATTTAAAGGAAAAACACAAACCAATCCACTAAATAAATACAACAAAGACAATCCCTCTTCTTGCTCTT
CATCATGATCCAATCATCTTAACTAGTAATCAGTGGAAGTGGTTAGTCCATGTCCAGCTGACAACTGCAGGACCGAATGATACAGCTGGGTTCATGGATG
CTCCATCGAAAGCTCCACCGGCCAAAATGTTAGCTCCAACAATGAAACCAATGGCAAGGGGTGCAATTGTTCCCAAACTTCCCTTCTTTGGATCAATGGC
TGTTGCATATACAGTGTATACAAGACCGAATGTCATCACTATCTCGAATACGAAAGCGTTCCAGACTGTCACTCCAGATGACAATGCAAAAGCCGATGTA
ACCTGTAGGGAAAAAACAACCCAACATACATCAGCTAAATTTCAACTGCACTAGCAGAAAAAAAGAATAACAAAACGCACGTTTTACTACTGGAAAGTCA
TATTAACCTGACGTTACCGCAGGTCTAAGAAGGTTTGTTAGAGAACTACTATAAACAAATCAGATACATATGATGCTAATTAAATTTGAAGTTGATCTAA
AATGTTAGCAGCAACAACAACAAAGATCATTTGTAGGTTTGTCTTACCAAACCACCGGTGGCGAATTTAAGGAGTGCGCAAGCAACGACGGAGCCGAGGA
GTTGAGCAATCCAGTAGAGAATACCACGAAGAAGAGTGATATTACCACCAACGAAAGCACCGAAGGTAACAGCAGGGTTAACATGACCCCCAGAGATGTT
AGCACCAACAGAAACCGCAACAAATAGTGCGAAAGCATGAGCTAATGAGGCAGAAACAAGACCAGCAGGACTACTAGCTCCATCATTGTGAGGAATCACG
GCAATGGTTACTGGCTTAACCAGTTAACCAGTCATCAATTATTAGGTTGGGCTGCCGAATGAACTGTTGCTGTTGGTGATAACATGTAGTTGGTTGAACA
TAACATTCCATTACTTCAAATATTGGACGGTAGGATCTGTCAAAGAATTTCTCTTCCAACGATCTAAATGTTTATATTTGATTGAGACCCATCCAGCTCA
AACGTCGCCTCCAAACCAGTCTCGTGCTGACACGTGAACCACACGGATAAGGGCCACGTTAGGTGTCTCTATTCCACGATCATGACCATTTCTGAACTTC
ATTCTCGAAGGGTCTGAAAAGATTAATGGTGTTCGATTAACAAATTAGATAAACACTTTCTTA