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Detailed information on CNT30423542


BLAST search results

BLAST vs Swiss-Prot:
sp|P34823|EF1A2_DAUCA, E-value = 4e-113

BLAST vs NONCODE:
NONGMAT001703, E-value = 1e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020493Papaver somniferumCitrullus lanatus70.5348.0683.02742forward
CNT3053016Papaver somniferumAmborella trichopoda47.7254.4584.06502forward

Expression of CNT30423542

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKQETKMTTTEVNKTKPFCRPS*

>peptide 2 (45 aa)
MVSLAQRCCQEPQGELVDLSIMLSPSNPEIGTKAIFSGLYPTFFK*

>peptide 3 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 4 (40 aa)
MLSRASRRVGGPFNHVISLESRDRNEGNFFWVVSNLLQVR*

Sequence

>CNT30423542
TGATGAGAAAACATTTCTGCAGACACTATTTTCATTAAACTGGGAAAGAGATACGCAAATAAAAAGTTGTTAACAGCAACTTACAAACCAAAATCCATAA
CAAGTTTTCAATTAACTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTTTGCATCTGGATGCTCAACAAAACAAAGGCAACAAAAG
ATATAAAACTGCAATGATAGCTAACCAAAGCAAACAAGAAACAAAAATGACTACTACTGAAGTAAACAAGACAAAACCCTTCTGCAGACCCTCTTAGCAC
CATCCCTGTACTTACTGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCTGTTGGATCCTTCTTCTCAACTCCCTTGATGACACCA
ACAGCAACTGTCTGCCTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGGTACTGAGCGAAGGTTTCTACAACCATGGGCTTGGTTGGAATCATCTTAA
TAATACCAGCATCACCGTTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCTATCTATCTTGGTTTGGATCTCAGCAAACTTAACAGC
AATGTGAGATGTGTGACAATCCTTCACTGCAACATTCTTGACATTGAACCCAACATTGTCTCCTGGAAGAGCTTCTAGAAGGGCTTCGTGGTGCATCTCC
ACAGACTTAACTTCAGTGGTCAAACCGGTGGGTCCAAAAGTAACAACCATACCAGGCTTGATGACTCCAGTTTCAACACGTCCCACTGGCACAGTTCCAA
TACCTCCAATCTTGTAAACATCCTGAAGGGGAAGACGAAGGGGCTTGTCTGATGGTCTCTTTGGCTCAGAGATGTTGTCAAGAGCCTCAAGGAGAGTTGG
TGGACCTTTCAATCATGTTATCTCCCTCGAATCCAGAGATAGGAACGAAGGCAATTTTTTCTGGGTTGTATCCAACCTTCTTCAAGTAAGATGAGACCTC
CTTCACAATTTCATCGTACCTGGCCTTTGAGTACTTGGGGGTGGTGGCATCC