Detailed information on CNT30423483


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT003157, E-value = 4e-104

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30590460Papaver somniferumMusa acuminata25.8369.0185.66265forward
CNT30355697Papaver somniferumLactuca sativa68.0385.0284.81698forward
CNT3050518Papaver somniferumCucumis sativus57.695.1783.25591forward

Expression of CNT30423483

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MMMTWEVKLAASLAGSSLELEATKPRLRSFTATFLTLNPTLSPGRA*

>peptide 2 (43 aa)
MGLVGIILIIPASPFFKNLGSFSSSFPDRLSILVWISANLTAM*

>peptide 3 (93 aa)
SADTIFIKLGKRYANKKLLTATYKPKSITSFQLTEQPKLMLPPPIKHPGLHLDAQQNKGNKRYKTAMIANQSKQETKMTTTEVNKTKPFCRPS*

>peptide 4 (67 aa)
MVHDDDLGGEVGSFPGRIVLGVGGDETTLEILHCNILDIEPNIVSWKSLMTPVSTRPTGTVPIPPIL*

>peptide 5 (37 aa)
MVSLAQRCCQEPQGELVPCTSQGWWTFQSCYLPRIQR*

>peptide 6 (41 aa)
MLSRASRRVGPLYQSRLVDLSIMLSPSNPEIGTKAIFSGLYP

Sequence

>CNT30423483
TCTGCAGACACTATTTTCATTAAACTGGGAAAGAGATACGCAAATAAAAAGTTGTTAACAGCAACTTACAAACCAAAATCCATAACAAGTTTTCAATTAA
CTGAACAGCCCAAACTCATGTTGCCACCGCCTATCAAGCACCCAGGTTTGCATCTGGATGCTCAACAAAACAAAGGCAACAAAAGATATAAAACTGCAAT
GATAGCTAACCAAAGCAAACAAGAAACAAAAATGACTACTACTGAAGTAAACAAGACAAAACCCTTCTGCAGACCCTCTTAGCACCATCCCTGTACTTAC
TGGAGTACTTTACTTCTTCTTGACAGCAGACTTGGTAACCTTGGCTCCTGTTGGATCCTTCTTCTCAACTCCCTTGATGACACCAACAGCAACTGTCTGC
CTCATGTCCCTAACAGCAAAACGTCCAAGAGGTGGGTACTGAGCGAAGGTTTCTACAACCATGGGCTTGGTTGGAATCATCTTAATAATACCAGCATCAC
CGTTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTTCCAGATCGCCTATCTATCTTGGTTTGGATCTCAGCAAACTTAACAGCAATGTGAGATGTGTG
ACAGTCAAGAACTGGAGCATAACCATTACCGATCTGACCAGGATGGTTCATGATGATGACCTGGGAGGTGAAGTTGGCAGCTTCCCTGGCAGGATCGTCC
TTGGAGTTGGAGGCGACGAAACCACGCTTGAGATCCTTCACTGCAACATTCTTGACATTGAACCCAACATTGTCTCCTGGAAGAGCTTGATGACTCCAGT
TTCAACACGTCCCACTGGCACAGTTCCAATACCTCCAATCTTGTAAACATCCTGAAGGGGAAGACGAAGGGGCTTGTCTGATGGTCTCTTTGGCTCAGAG
ATGTTGTCAAGAGCCTCAAGGAGAGTTGGTCCCTTGTACCAGTCAAGGTTGGTGGACCTTTCAATCATGTTATCTCCCTCGAATCCAGAGATAGGAACGA
AGGCAATTTTTTCTGGGTTGTATCCA