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Detailed information on CNT30422352


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0ZIY9|CYB6_VITVI, E-value = 1e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315736Papaver somniferumCorylus avellana26.0580.1587.16218forward
CNT30378680Papaver somniferumArabidopsis thaliana21.8615.0492.35183forward
CNT30730483Papaver somniferumCorchorus capsularis29.1555.3389.75244forward
CNT30401838Papaver somniferumBeta vulgaris35.4877.3486.2297forward
CNT30632354Papaver somniferumVigna unguiculata49.8228.888.97417forward
CNT30199319Papaver somniferumPisum sativum49.9420.7889.71418forward
CNT30504292Papaver somniferumNicotiana attenuata55.9126.2392.31468forward
CNT3090412Papaver somniferumSolanum tuberosum34.6513.1391.72290forward
CNT30193370Papaver somniferumSecale cereale54.3628.1790.33455forward
CNT30286546Papaver somniferumTriticum aestivum48.5127.3889.66406forward
CNT30398533Papaver somniferumTriticum turgidum22.4660.4591.49188forward
CNT30543576Papaver somniferumBrassica napus51.8537.8791.47434forward
CNT30554238Papaver somniferumOryza glaberrima56.3944.0790.04472forward
CNT30439089Papaver somniferumAegilops tauschii54.3627.9889.89455forward
CNT30667320Papaver somniferumTriticum dicoccoides45.8864.2191.67384forward
CNT30230643Papaver somniferumAnanas comosus42.0546.5691.48352forward
CNT30655369Papaver somniferumRosa chinensis55.9116.292.09468forward
CNT30210627Papaver somniferumHelianthus annuus88.0562.5688.06737forward
CNT30679835Papaver somniferumTriticum urartu26.2817.1591.36220forward
CNT30595910Papaver somniferumOryza meridionalis20.7958.1989.66174forward
CNT30357898Papaver somniferumLactuca sativa100.9642.3388.05845forward
CNT30574487Papaver somniferumVitis vinifera59.1480.2388.89495forward
CNT3053422Papaver somniferumAmborella trichopoda32.511.1687.87272reverse complement
CNT3035458Papaver somniferumCucumis melo55.9125.3891.45468forward
CNT30499024Papaver somniferumDigitaria exilis48.3926.6187.41405forward
CNT30117031Papaver somniferumOryza nivara49.8222.6490.17417forward
CNT30556546Papaver somniferumPanicum hallii37.0480.9485.81310forward

Expression of CNT30422352

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MRRDIFTSYIICNRLNLETLFEPIIYFTHIPEIPKQRNSAVELPECPIKKS*

>peptide 2 (41 aa)
MPYKKILSNSFSIEKPGLHGSYGPNSLKSRPVKQKNYKSLK*

Sequence

>CNT30422352
GTCCCGAGGTAAGGAATAACCAGTTACACCAAAAGATGCTGTCAATAAACCCAGAATCACACCCGTAACCCAAGTCAATTCGCAGGGTTTTTTAAATACA
CCGGTGAGATACACACGAAATACATGCAGGATCATCATTAAGACCATCATACTTGCTGACCATCGATGAACTGATCGGATTAACCAACCAAAGTTAGCTT
CAGTCATTATGTATTGAACCGAGGTAAAAGCCTCGGTAACGGTCGGACGATAGTAAAAAGTCATAGCAAACCCCGTCGCTACTTGTACTAAAAAACAAGT
AAGCGTAATCCCCCTAGACAATAAAATATGTTGACATGAGGAGGGACATATTTACTAGTTATATCATCTGCAATCGCTTGAATCTCGAGACGCTCTTCGA
ACCAATCATATACTTTACTCATATTCCGGAAATACCGAAACAAAGAAATTCCGCGGTCGAACTACCAGAATGCCCTATAAAAAAATCCTAAGTAATTCAT
TTTCTATTGAAAAGCCAGGACTTCATGGTTCTTATGGACCTAATTCATTGAAATCCCGTCCAGTAAAACAGAAGAATTATAAATCTCTAAAATAATACAT
AGGAATACCGCAAATAAAGCCATTGCGACACCCATCAAAGGGGTAGTTCCCCATCCAGGAGCTACTTTACCATATTCTGAATTCAACGGTTTCAATAAAG
CTCCTACATTTGTTCGTCTTGGACCAGATCTAGAACTACCCTCAACGGTTTGTGTATCCATAAATACTCTTGCATTGGTTGAGATCTGTTGACTTTGTAT
ACCATTCCGTTGTAAATAAACGATCTTATCATAGATC