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Detailed information on CNT30422340


BLAST search results

BLAST vs Swiss-Prot:
sp|P37392|TBB1_LUPAL, E-value = 4e-119

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692356Papaver somniferumOryza sativa14.426.9981.15122forward
CNT30522713Papaver somniferumSetaria italica20.1946.0983.04171forward
CNT30516889Papaver somniferumJuglans regia16.5323.1484.29140forward
CNT30710178Papaver somniferumGlycine max34.2468.487.59290forward
CNT30168132Papaver somniferumPistacia vera18.337.7183.23155forward
CNT3092760Papaver somniferumSolanum tuberosum19.3623.786.59164forward
CNT30681848Papaver somniferumTriticum urartu29.428.1481.93249forward
CNT30721780Papaver somniferumTriticum spelta13.9352.2184.75118forward
CNT30363168Papaver somniferumSorghum bicolor23.2619.9884.77197forward
CNT3054138Papaver somniferumAmborella trichopoda21.1335.3183.24179forward
CNT30119164Papaver somniferumCitrus clementina37.0767.3883.12314forward
CNT3099786Papaver somniferumOryza rufipogon20.0737.0482.94170forward
CNT30117026Papaver somniferumOryza nivara26.833.7880.18227forward
CNT30602704Papaver somniferumGaldieria sulphuraria35.5448.1681.4301forward

Expression of CNT30422340

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPFLTLLVEYHRQWTSHCWESIQQSTMNSCSEH*

>peptide 2 (40 aa)
MLLSASVNSISSIPSPVYQCKKAFLRNIAVNCSLTLRNIS*

>peptide 3 (35 aa)
MQESLSTEHSCELLTDSTEHLLNRCGISNECRCHF*

>peptide 4 (34 aa)
MNVDAIFNPVGGISQTVDFTLLGIHSTKYDEFLF*

>peptide 5 (92 aa)
TEKTRRGKRAVYYVIILSYNIERSLVQLSTLVTCSTLTYHIVKKVQNQNKVAKPKHKMQLQGKLKHLPLSISQTKLDDILNYLYHLFILHSS*

Sequence

>CNT30422340
ACAGAAAAAACAAGACGGGGGAAAAGAGCAGTCTACTATGTAATAATACTTTCATATAATATAGAAAGAAGTCTTGTTCAACTTTCAACACTAGTAACTT
GTTCAACTCTAACATACCATATAGTTAAAAAGGTTCAAAACCAAAATAAAGTCGCCAAACCAAAACACAAAATGCAGCTTCAGGGGAAACTAAAACACTT
GCCATTATCAATCTCTCAAACCAAACTAGATGATATTCTGAACTACTTATACCACTTATTTATACTTCACTCCTCTTGAAGTTCCTCCTCTTCTTCGTAC
TCTTCTTCCTCATCAGCAGTTGCGTCCTGATATTGTTGGTACTCTGACACTAAATCATTCATGTTGCTCTCAGCTTCAGTGAATTCCATTTCATCCATTC
CTTCTCCTGTGTACCAATGCAAGAAAGCCTTTCTACGGAACATAGCTGTGAACTGCTCACTGACTCTACGGAACATCTCTTGAATAGATGTGGAATTTCC
AATGAATGTAGATGCCATTTTTAACCCTGTTGGTGGAATATCACAGACAGTGGACTTCACATTGTTGGGAATCCATTCAACAAAGTACGATGAATTCTTG
TTCTGAACATTGATCATGTTCTTGGCATCCCACATTTGTTGAGTAAGTTCAGGTACTGTTAGGGTTCTGTACTGCTGTGACCCACGGGAGGTAAGAGGTG
CAAAACCAACCATAAAGAAATGGAGACGAGGGAAGGGAATCAGGTTGACAGCTAGCTTGCGAAGATCAGAGTTAAGTTGACCAGGGAATCGAAGACAGCA
TGTTACCCCACTCATGGTAGCAGAAATGAGATGGTTCAAGTCTCCAA