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Detailed information on CNT30421579


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526567Papaver somniferumPhaseolus vulgaris8.8422.0786.0879reverse complement

Expression of CNT30421579

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MANVSTTSKPIDAKATVFGGYLFLLCGSISFLLFLFSAIITKLLPPSSNQILSAVQNDRYYCFLVPLTLPVLVVAVYFHWLSMKLFKHA*

>peptide 2 (36 aa)
RRHNHRLLRFFYLSQCVCDSRYFRHSHSYWQAVVIS*

>peptide 3 (99 aa)
AATTTVSSDFSISRSAFVTLVTSAIHIHTGKLLLLVDGIFNLSTSSDALRAVNRTENSNLRWRTFQPHQNLLMQRQLCLGDTYFFYAAPFPFCCFSFRR*

>peptide 4 (30 aa)
MFTGGKSINLVVHVISVHLIVHVICVAGRI*

Sequence

>CNT30421579
CGCCGCCACAACCACCGTCTCCTCCGATTTTTCTATCTCTCGCAGTGCGTTTGTGACTCTCGTTACTTCCGCCATTCACATTCATACTGGCAAGCTGTTG
TTATTAGTTGACGGAATCTTCAATCTTTCAACTTCATCTGATGCTTTACGCGCTGTAAATCGCACCGAAAACAGTAATCTGAGATGGCGAACGTTTCAAC
CACATCAAAACCTATTGATGCAAAGGCAACTGTGTTTGGGGGATACTTATTTCTTTTATGCGGCTCCATTTCCTTTTTGTTGTTTCTCTTTTCGGCGATA
ATTACCAAGCTTCTTCCACCATCTAGCAATCAAATACTATCAGCTGTTCAGAATGACAGGTACTACTGTTTCCTGGTGCCGTTGACTCTTCCTGTCCTCG
TGGTGGCTGTATATTTTCATTGGCTCAGCATGAAACTTTTCAAACATGCATGAATTCAGTACAGATGATGACTCAGATATAACAATGGAATGAGGCCAGG
ACAAAGTGAAGTGTTTGATTCAAGACAGTAGTCTGCTGAGATTAGGTTGTTTCAAAGGATAGCATTTGGCAGCCAGGATTACAGTACTGTTTTCTTTCTT
TTTTATCCGAGGTAGCTATACTTGAGAGTACACTGTCATTGGCAAAAGAGGGAGGGAGAGACTGGTTTTAAATTCTAGATCTTTGAAGTAGCAGACTGAG
ATGTTTACCGGAGGTAAATCTATTAATTTAGTTGTACATGTTATATCTGTTCATTTAATTGTACATGTTATATGCGTGGCAGGTAGGATCTGAGTAAGTT
CTCCTTACCATATTCTGTAGTTGTTTCCACTGCAACATAATTTCTTTCTCCCCTTTAATGTATATTTATCATGCAAAAATTTTCTGTGTTGTCG