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Detailed information on CNT30420891


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Papaver somniferumOryza sativa21.9718.8392.54590forward
CNT30678576Papaver somniferumSetaria viridis13.0369.1790.57350forward
CNT30521002Papaver somniferumSetaria italica4.1724.8398.21112reverse complement
CNT30550263Papaver somniferumIpomoea triloba225.1292.55591reverse complement
CNT30378671Papaver somniferumArabidopsis thaliana5.6253.5592.72151forward
CNT30632593Papaver somniferumVigna unguiculata23.938.0391.12642reverse complement
CNT30635645Papaver somniferumCapsicum annuum1565.1189.33403reverse complement
CNT3098505Papaver somniferumSolanum tuberosum12.133.1394.15325forward
CNT30304298Papaver somniferumTriticum aestivum21.9722.392.37590forward
CNT30220645Papaver somniferumHordeum vulgare6.2537.1794.05168forward
CNT30400948Papaver somniferumTriticum turgidum21.9723.692.2590forward
CNT30569653Papaver somniferumActinidia chinensis11.546.0589.97309forward
CNT30585815Papaver somniferumMusa acuminata21.9724.3189.32590reverse complement
CNT30234810Papaver somniferumBrassica oleracea6.2222.0688.02167forward
CNT30554921Papaver somniferumOryza glaberrima5.1439.0993.48138reverse complement
CNT30147394Papaver somniferumMedicago truncatula21.9729.6291.53590reverse complement
CNT30440683Papaver somniferumAegilops tauschii21.9761.0892.54590reverse complement
CNT30248040Papaver somniferumAvena sativa20.6341.1691.34554forward
CNT30662061Papaver somniferumTriticum dicoccoides21.9730.7592.37590forward
CNT3081478Papaver somniferumBrassica juncea21.9750.9591.36590reverse complement
CNT30263293Papaver somniferumBrassica rapa4.126.3284.55110forward
CNT30143344Papaver somniferumLolium perenne21.9726.3792.71590forward
CNT3017904Papaver somniferumZea mays22.4936.790.23604forward
CNT30218527Papaver somniferumKalanchoe fedtschenkoi13.123.6490.34352forward
CNT30655385Papaver somniferumRosa chinensis21.9725.0592.37590reverse complement
CNT30203595Papaver somniferumHelianthus annuus21.9732.2191.36590reverse complement
CNT30689128Papaver somniferumTriticum urartu21.9731.7492.03590reverse complement
CNT30595506Papaver somniferumOryza meridionalis12.4330.3694.61334forward
CNT30360998Papaver somniferumLactuca sativa6.8963.7997.3185reverse complement
CNT30369805Papaver somniferumOryza glumipatula21.9741.1491.19590reverse complement
CNT30323793Papaver somniferumAsparagus officinalis5.7749.0594.84155reverse complement
CNT30151602Papaver somniferumBrachypodium distachyon6.1432.9394.55165forward
CNT30104648Papaver somniferumOryza rufipogon16.9878.2293.42456forward
CNT30575706Papaver somniferumOryza barthii21.8524.0990.97587reverse complement
CNT30582488Papaver somniferumEchinochloa crusgalli21.9748.692.71590reverse complement
CNT30495774Papaver somniferumDigitaria exilis14.6399.2493.89393forward
CNT30116696Papaver somniferumOryza nivara21.9714.8892.54590forward
CNT3040451Papaver somniferumMarchantia polymorpha6.7430.8393.92181reverse complement

Expression of CNT30420891

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MMKVFSRACTTSPEYSQYIWRETILPIEVRMGSGLFTSHQSARFFFRN*

>peptide 2 (51 aa)
MLHRLCRPPSIPLSFGLATVLLRRSVSRVSWAPDLHQGRTLIVYSMDYQGI*

>peptide 3 (71 aa)
MLSHISVGRDPESYLRFWPSFVDLRISPVHTKFHSHLSYPSSLVSKAIRHFLATFTFNPLNGLRSLYAQLF*

>peptide 4 (90 aa)
MISGVIVRFGISAGVADTPGLVVVVATSGIVAAMSGSAADTLGFAIVPKKGRTTSSNNSMGDAIICCSPMTGIAEEPEPFLGTASTLVIG*

>peptide 5 (31 aa)
MQHLYESQYHPIKDGLVHMSRAGKVLRVVSN*

>peptide 6 (31 aa)
MSIKGSTSKPNPLYFLALHAIGFVPQHQRFG*

>peptide 7 (35 aa)
MTLDLPLGCGISFQYYRLVLETRIPGVGSFELLLL*

>peptide 8 (39 aa)
MTIPYHVTLFLPFLGFKVVYPRLMILTIGLLYLTVGLIS*

Sequence

>CNT30420891
GTTCGCTAATAGGATCTGTTCTTAACCAATGACAATACCATACCATGTCACTCTCTTTCTTCCTTTCCTCGGGTTTAAGGTGGTATATCCCCGGCTCATG
ATCCTTACAATTGGCCTCCTCTATCTGACTGTTGGACTAATCTCTTAGGTTAAGAATGCGGATAATGGTCATGAAGGTGGCTTGGATGAATGAGTATCAA
GGGTTCGACTTCCAAACCTAATCCTCTTTACTTCTTGGCCCTTCATGCTATTGGTTTTGTTCCCCAGCATCAAAGGTTCGGCTGACATTCCGCATCTCGG
CAATCGAAAGAATTGCTTTCTTACGTAAGCGCTATTGGGTGACACCCTAGATTTCATACTGTTCTGGATCACTCTGTGTTTCACACTCTGGAACCTCCCA
TTACTCATTAATAATGCCAGAGGTAAGAATCCTGTACTCTGTTTCCGTAGGAAGCGGCTCATTCTGCGAGAGATAGAGTGTCCTAACTCTTTGTATCACT
CGGGCTTCGAGCTCAAGCTTCCTTTCCACTTGCTCTATGATCTCTGGAGTCATCGTAAGGTTTGGCATTTCTGCCGGCGTAGCAGACACGCCTGGACTTG
TAGTTGTAGTTGCAACTTCAGGAATCGTAGCAGCCATGTCTGGAAGTGCTGCAGATACCCTAGGATTCGCTATAGTGCCTAAGAAGGGTCGAACTACATC
ATCTAATAATTCCATGGGGGATGCTATCATATGTTGTTCCCCCATGACAGGGATCGCTGAAGAACCCGAACCTTTTCTAGGAACTGCTTCTACGCTTGTC
ATCGGATGAGTTCTATCTACCTTATGAAGAGATGACAGCTTAAGAAGAAAGAAAGGAATATACGCGTTCTTCTGGATTATATGAACGACATGAAAGCTAT
TCTTTAAGACTTTAATAAAACCAAACGGGTGCCTCTGGTGGGCGGCACTGATCTTTCCTTCTTAGGCACCGTATCTCCTCGCCAACCTACTTTATTATCC
ATGACCTTGGACCTGCCCTTGGGTTGTGGTATATCATTTCAATATTATAGGTTGGTGTTAGAGACTCGGATACCCGGGGTCGGTTCTTTTGAACTTCTTC
TCTTATGATGAAAGTGTTTTCCCGTGCTTGTACCACGTCTCCCGAATATTCTCAGTACATATGGCGTGAGACGATTCTACCTATCGAAGTCAGAATGGGA
TCGGGTCTTTTCACGTCTCACCAAAGTGCCCGGTTTTTCTTTAGAAATTGATGAACAAGAGGTAAAGTTGGTCAAGGTGTCACAAAAGGACGTTCCAATA
AGAAACGGCTCCTACCTATAAAGCCGTTGCGCGTTAGCACGCGCATCCGTTTTCTTGGCCCTCTCTGATTCGATCCAGCCACAGGTTTCCCTACGGCTAC
CTTGTTACGACTTCACCCCAGTCGAAGACCCCACCGTGGTATGCGGCAATAAGACCACCAAGAGCCTTTGTGTATTGGTACACAGGTAAGGAGGTTTACC
CCCACTTGCCTTTTAAGGTAAGGAATGGATGATCATTGATCCGATGCTTCGGGCGAAACCAATTCCCAGGGTGTGACGGGCGGTGTGTACAGGGCCCGGG
TACAGATTCACCGCGGCATGCTGATCCGCGATTACTAGCGATTCCAACTTCATGTTCCCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCTGGA
TTCGCTCCGCCTTACGGCCTTGCTTCCCACTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACC
TTCCTCCAGTATATCACTGGCAGTCCCTAGTGAGAGCGGCATGCACCTTGATTCTTTCGAAGCCATTTGGTGGCAGTAGTACTATCACCACTACGTACCA
CTATACCGTGCCAACTATCGGGCGGCTCTCGCTTGAATTAGATATAGATAGAGTCTTCCTAGTCTGTAGGTCTTGCCCTATCTTGCTATCTATGAGTCTG
AGCCCTAAAGGGCCTAGAAGGTGCTGGCACTTAGTAGCACTGACGCGCGTTACGTCACTCGGCTCCTAGGCTCACTTCGGTTTACAAAGGTGACTTGAAA
ATCAGGCGCATGTCTCAGCAACACAAAACGAGGGTTTCGCTCGTTATAGGACTTAACCAAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCT
GTATGAAAGTCAGTACCATCCCATTAAGGACGGTCTAGTTCATATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACC
GCTTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCTCAGGCGGAGTGTTTCACGCGTTAGCTGGGCCCCTGATTTGCACCA
AGGGCGAACACTCATCGTTTACAGCATGGACTACCAGGGTATCTAATCCTCTTTGCTCCCCATGCTTTCACACATCAGCGTCGGTAGAGACCCAGAGAGC
TACCTTCGCTTTTGGCCTTCCTTCGTAGATCTCCGGATTTCACCCGTACACACGAAATTCCACTCTCATCTATCTTACCCAAGTTCATTGGTTTCAAAAG
CAATCCGCCACTTTTTGGCGACTTTCACTTTCAACCCGTTGAACGGCCTACGTTCCCTTTACGCCCAGTTATTCTGAAGAACACTC