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Detailed information on CNT30420453


BLAST search results

BLAST vs Swiss-Prot:
sp|Q75GA5|TIP41_ORYSJ, E-value = 9e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698180Papaver somniferumQuercus lobata12.3232.0785.45110forward
CNT30374560Papaver somniferumArabidopsis thaliana12.3220.6485.45110forward
CNT30382128Papaver somniferumManihot esculenta15.0134.3688.81134forward
CNT3096857Papaver somniferumSolanum tuberosum11.3136.288.12101forward
CNT30542059Papaver somniferumBrassica napus22.0624.6985.28197forward
CNT30146490Papaver somniferumMedicago truncatula17.4743.3384.62156forward
CNT30310223Papaver somniferumCamelina sativa18.3725.0487.2164forward
CNT30726138Papaver somniferumLupinus angustifolius11.9821.7587.85107forward
CNT3050798Papaver somniferumCucumis sativus11.3130.5190.1101forward

Expression of CNT30420453

Peptides detected in this lncRNA

>peptide 1 (31 aa)
KKMNKHTSAKFQLHLQQKNKQNARFTTGKSY*

Sequence

>CNT30420453
AAAAAAAATGAACAAACATACCTCAGCTAAATTTCAACTGCACTTACAGCAAAAGAACAAACAAAACGCACGTTTTACTACTGGAAAGTCATATTAACCT
GACTTTACCGCAAGTCTAAGAAGGTTTGTTAGAGAACTACTATAAACAAATCAGATACATATGATACTAATTAAATTTGAAGTTGGTCTAAAATTTTGTA
GGTTTGTCTTACCAAGCCACCGGTGGCGAATTTAAGGAGTGCGCAAGCAACGACGGAGCCGAGGAGTTGAGCAATCCAGTAGAGGATACCACGAAGAAGA
GTGATATTACCACCAACGAAAGCACCGAAGGTAACAGCAGGGTTAACATGACCACCAGAGATGTTAGCACCAACAGAAACCGCAACAAATAGTCCGAAAG
CATGAGCTAATGAGGCAGAAATAAGACCAGCAGGACTACCAGCTCCATCATTGTGAGGAACCATGGCAATGGCAACTGGTTTAACCAGTTAACCAGTCAT
CAATTATTAGGTTGGGCTGCAGAATGAATTGTTGCTGTTGGTGATAACATATAATTGGTTGAACATAACATTCCATTACCTCAAACATTGGACGGTAGGA
TCTGTCAAATGTTTTCTCTTCCAACGATCTAAAGGTTTAGATTTAATCGAGACCCATCCAGCTCAAACTTGGCTTCCAAAACAGTCTCGTGCAGACACGC
GTACCACATGGATAAGGGCCACGTTAGGTGTCACTATTCCGTGATCATGACCATTTCTGAACTTCATTCTCGAAGGGTCTGAAAAGATTAATGGTGTTTG
ATTAACAAATTAGATAAACACTTTCTTATCTTCTCCAATATAATTGATTAATGGATATGTTAGTCTAATAAAGCAAATGGAATTTTAAAGGGA