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Detailed information on CNT30420022


BLAST search results

BLAST vs Swiss-Prot:
sp|Q38JH8|METK2_SOLTU, E-value = 1e-109

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30368062Papaver somniferumSorghum bicolor23.4219.5686.51215forward

Expression of CNT30420022

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLQTPKTHYQLREVSPRARFPRFFFSIMLN*

Sequence

>CNT30420022
AATAAATAAGAAAAAGCATTGAGCAGTTCATGTATTTAATTTCACTTGATTATATTATATGATCAAACAAATTGAAACATCCAAACAATTTGGTGCAGTA
AGAAACAATCACTGACTACTCGAAGAAAAGACATTTTCCCTTCAAGAGAAAAACAAGAACACAATAATAATAATAATAATAATAATAATGCTACAAACTC
CTAAAACCCACTACCAACTCAGAGAAGTTTCACCTCGGGCACGGTTTCCTCGCTTTTTTTTCTCAATTATGTTGAATTAAAAAGTACAGATAGATATGCT
GTTTCTTATATTCCCCATATAATTTCCTTATAAACGAGAATCAGAATCAAGCTTGCTTGAGGTTCTTGACAGTCTCCCAGGTGAAGTCAGGGTCGTCACG
GCCGAAGTGTCCGTAAGCAGCAGTTTTCTGGAACCTGAAGTTACCTCCTCTCTTCAAGTCAAGGTTAATTGACATCATTCCGGGCCTGAAGTCAAAGTTC
TCCTTGATCAGCTTCAATATGTCCTTGTCTGGGATAGTACCTGTCTTGTAAGTGTCAACAAACACGGACAATGGCTCTGCAACACCGATGGCGTAAGAAA
CTTGGACAATGCAACGACGGGCAAGTTTAGAAGCAACAATACTCTTGGCTGCCTGCCTTACAATGTAAGCACCACTGCGATCCACCTTGGTAGGATCCTT
TCCAGAGAAAGCACCACCACCGTGAGCACCCCAACCACCGTAGGTGTCAATAATGATCTTCCTACCAGTTAGTCCAGCATCTCCGTGAGGTCCACCGATG
ACAAAGCGACCAGATGGGTTCAAGTGAAAGATGGTGTTGTCATCAAGGTATTGGGCAGGGATGACTGGCTCGATCACATGCTTCTTAAGGTCGGCTGCAA
TCTGTTAATTGGTTATAG