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Detailed information on CNT30419844


BLAST search results

BLAST vs Swiss-Prot:
sp|Q14FC6|PETD_POPAL, E-value = 8e-113

BLAST vs NONCODE:
NONSTUT000261, E-value = 1e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30407229Papaver somniferumBeta vulgaris58.12101.4686.17347forward
CNT30632102Papaver somniferumVigna unguiculata82.7574.6289.68494forward
CNT30201894Papaver somniferumPisum sativum78.8926.4590.66471forward
CNT3090242Papaver somniferumSolanum tuberosum83.5842.6987.98499forward
CNT3085551Papaver somniferumVigna radiata24.9665.3587.25149forward
CNT30556068Papaver somniferumOryza glaberrima63.9952.0489.27382forward
CNT30145111Papaver somniferumMedicago truncatula31.8342.5193.16190forward
CNT30435040Papaver somniferumAegilops tauschii81.5754.1788.3487forward
CNT30662532Papaver somniferumTriticum dicoccoides6657.1887.31394forward
CNT30309624Papaver somniferumCamelina sativa64.1590.7688.51383forward
CNT30131654Papaver somniferumLolium perenne44.0589.4686.69263forward
CNT30230699Papaver somniferumAnanas comosus62.1463.5392.18371forward
CNT30215737Papaver somniferumHelianthus annuus45.7389.5190.84273forward
CNT30622073Papaver somniferumCajanus cajan66.3398.7592.93396forward
CNT3057915Papaver somniferumAmborella trichopoda11.0627.3990.9166reverse complement
CNT3025179Papaver somniferumPopulus trichocarpa62.984791.76376forward
CNT30104480Papaver somniferumOryza rufipogon48.5857.288.62290forward
CNT30557534Papaver somniferumPanicum hallii26.9726.5286.96161forward

Expression of CNT30419844

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MRVLHNNYDPSLLPIWLLIQDHSSQVFLLLP*

Sequence

>CNT30419844
GTTGAGTCAATTTAAAAAAGACCTAAAGTTAAAGATTTATCAATAGGTAATGTTGATCCAATACCCAACCAAAGAGCTACTGCGGTCCCAATCAAAAAGA
CAGTTGTAGCTACTGGACGACGAAACGGGTTTTGGAATTTATTAACATTCTCCAAAAAGGGTACTATCAATAATCCCGCCGGTACTGAAACCATTAAAAG
AACCCCCAACAATTTATTTGGTACTGTGCGAAGTATTTGAAATACGGGAAAGAAGTACCATTCGGGTAATATTTCCAAAGGAGTAGCAAACGGATCTGCA
GGTTCGCCAATCATTGACGGTTCTAGAACCGCTAAACCTACGTTACATGCAATAGTACCTAGAATTACTACTGGAAAAATATCTAAAAGATCGTTAGGCC
ATGCGGGTTCTCCACAATAATTATGACCCATCCCTTTTGCCAATTTGGCTCTTAATACAGGATCATTCAAGTCAGGTTTTTTTGTTACTCCCATAATCCA
TTTTCTCTTCTTAGAATCCACTTCAACTATTCATATCAAATAAATAATACAATATTGTAGAGTTGAAGGTAAATATCCAAAAAAATGTCTTATTTTT