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Detailed information on CNT30419606


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0G9N7|RR16_LIRTU, E-value = 8e-52

BLAST vs NONCODE:
NONVVIT003033, E-value = 2e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3047211Papaver somniferumPrunus dulcis11.8920.6491.74109forward
CNT30622544Papaver somniferumCajanus cajan14.0727.6287.6129forward

Expression of CNT30419606

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKKKTLFFNLHLQQNRLFKTINHERFNLSRPTKLKTPN*

>peptide 2 (68 aa)
MELIQYGIMNSHWFNRHIVIYTFILSFSIWKGPFFWRSLRKGFNLINPIFYSMSKRIYTENEEKNAFL*

Sequence

>CNT30419606
AGCAATCTAATAGTAAATTCGTATAAATAGAAAATAAAAAGAGTGAAAAAAGAAGAAATTACGGGAAGTTAAGTTCACATTATGGAACCCCCACTTTCTT
TTTCTTTGTTCATTATTTAAAGTTCGTTTGATTAACGGGAAGTTCCTTAAACACCTCTGCCTTCTTTGAAATATCATGAACGGTTCCTGTGGGTTGAGCG
CCTTTTTCAAGGTAATAGAGAATAGTGGGAACGTTTGAATAAGTTTGATTCTTTATCGGATCGTAAAAACCCACTTTCCGAAGATCTCTTCCTTCTCTTC
GGGATCGAACATCAATTGCAACGATTCGATAGATGGCTCGTTGCTTTCTACCACATCGTTTTAAACGAAGTTTTACCATAACTTTCCTCTAGTTTGGAGC
CGGTATGGAATTGATTCAATATGGAATCATGAATAGTCATTGGTTCAATCGGCACATAGTAATCTATACTTTCATACTTTCTTTTTCTATATGGAAAGGT
CCTTTTTTCTGGAGAAGTCTTCGCAAAGGATTCAATTTAATTAACCCCATCTTTTATTCTATGAGCAAAAGAATTTATACAGAAAATGAAGAAAAAAACG
CTTTTCTTTAATCTGCATCTTCAACAGAACAGATTGTTCAAGACGATCAATCATGAAAGATTCAACCTTTCTCGACCAACTAAACTAAAAACACCTAACT
AAAAAAAGGGGAGGGTCTTTAATTAAATTTCTAATACCGGAACAAAATGAATATTAAGTATTAACCAAAGAAATGGGTCCAATGAACTGGAAAGGCCAGA
AATGAGTCGATAGAATTAAAATTAACAAATCTCACATCTCTTCGAGAACCAAAGATCGATAAAACATCATTAAAAGCGTTTCGTTTTTAAAATTTTATAT
TTAAATATCAATAGAAT