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Detailed information on CNT30418079


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-124

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500348Papaver somniferumCoffea canephora65.6156.4182.69849forward
CNT3019912Papaver somniferumCitrullus lanatus68.1652.7882.43882forward
CNT3069547Papaver somniferumQuercus suber52.798.782.99682forward
CNT30406245Papaver somniferumBeta vulgaris46.9993.2583.39608forward
CNT30642231Papaver somniferumCannabis sativa70.1785.6683.04908forward
CNT30330420Papaver somniferumDioscorea rotundata68.752.5481.66889forward
CNT30111662Papaver somniferumFicus carica68.0865.1683.2881forward
CNT3050777Papaver somniferumCucumis sativus64.2285.5882.79831forward

Expression of CNT30418079

Peptides detected in this lncRNA

>peptide 1 (51 aa)
RKAGPQKIVLGKTDDLSSKSLAPAWCPQKVVCLETGRTSTASTCFLGQLQE*

>peptide 2 (43 aa)
MHHEIQSQRSTLIVHKFNQPNIKPSNCKYLITVPTDDKAANIA*

>peptide 3 (39 aa)
MTAHAPRNPITKKHTNSSQIQSTKHQTKQLQIPHYSANR*

Sequence

>CNT30418079
AAGAAAAGCTGGTCCCCAAAAAATCGTTCTAGGAAAAACAGATGATTTAAGCTCAAAGTCTTTAGCACCAGCCTGGTGTCCTCAAAAAGTAGTGTGCCTT
GAAACTGGAAGGACTTCCACAGCCAGCACTTGTTTTCTTGGGCAATTGCAGGAATGACTGCCCATGCACCACGAAATCCAATCACAAAGAAGCACACTAA
TAGTTCACAAATTCAATCAACCAAACATCAAACCAAGCAACTGCAAATACCTCATTACAGTGCCAACAGATGATAAAGCAGCAAACATAGCATAGTTTCA
ACAGAAGAAAGATGAGATAAGAATTTAAAAGATATTCTGCCTACTGGAGAGGACCACCACAAATGTCAACAATCTTTCAATAATCACCACCACGAAGACG
GAGGACAAGGTGAAGAGTGGATTCTTTCTGAATGTTATAATCAGCTAGAGTTCTTCCATCTTCCAATTGCTTGCCTGCAAAAATCAATCTCTGCTGGTCT
GGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTCACATTATCAATTGTGTCAGAACTCTCCACCTCTAAGGTTATAGTCTTTCCAGTCAAGGTCTTAA
CAAAAATTTGCATTCCTCCTCTGAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGAATATTGTAATCAGCAAGTGTACGACCATCTTCAAGTTGCTT
GCCCGCAAAAATCAATCTCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATTTTTGCCTTGACATTATCGATTGTATCAGAGCTTTCAACTTCAAGG
GTAATGGTCTTTCCAGTAAGGGTCTTCACAAAGATTTGCATACCACCACGGAGTCGAAGGACAAGATGGAGAGTAGATTCTTTCTGAATGTTGTAATCAG
CAAGAGTTCTCCCATCTTCGAGTTGCTTGCCTGCGAAAATTAACCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTCTTGAATCTTGGCTTTCACATTGTC
AATTGTGTCAGAGCTTTCAACTTCAAGGGTAATGGTTTTTCCAGTAAGGGTCTTCACAAAAATCTGCATACCACCACGCAGACGAAGAACAAGGTGAAGT
GTTGATTCCTTTTGAATGTTGTAGTCGGCAAGGGTACGACCATCTTCGAGCTGTTTACCAGCAAAGATCAATCTCTGTTGATCTGGGGGAATTCCTTCCT
TATCTTGGATCTTGGCTTTAACATTGTCAATGGTGTCGGAGCTTTCGACCTCAAGGGTAATGGTCTTACCAGTTAAAGTTTTCACAAATATTTG