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Detailed information on CNT30416813


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8MBG0|ATPB_CUSJA, E-value = 0.0

BLAST vs NONCODE:
NONORUT002105, E-value = 4e-78

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202141Papaver somniferumPisum sativum40.0548.4890.38894forward
CNT30710344Papaver somniferumGlycine max8.1538.482.97182forward
CNT30592630Papaver somniferumMusa acuminata12.4661.3784.17278forward
CNT3088631Papaver somniferumVigna radiata10.3933.6784.91232reverse complement
CNT30554166Papaver somniferumOryza glaberrima27.1563.2685.81606forward
CNT3082983Papaver somniferumBrassica juncea39.8337.0388.41889forward
CNT3018154Papaver somniferumZea mays33.2465.0986.12742forward
CNT30154378Papaver somniferumPrunus persica19.9497.889.89445forward
CNT30574483Papaver somniferumVitis vinifera4.2620.787.3795forward
CNT30645933Papaver somniferumCannabis sativa42.61100.7485.38951forward
CNT3058692Papaver somniferumAmborella trichopoda9.5955.4493.46214forward
CNT30104429Papaver somniferumOryza rufipogon29.3999.3986.13656forward
CNT30577541Papaver somniferumOryza barthii14.6540.1284.71327forward
CNT30116966Papaver somniferumOryza nivara44.6227.8184.84996forward
CNT30726985Papaver somniferumLupinus angustifolius55.1556.9190.411231forward

Expression of CNT30416813

Peptides detected in this lncRNA

>peptide 1 (33 aa)
LISFSTHPPFYFSCIRNAITVDSTQSAEPKYGV*

>peptide 2 (39 aa)
MSFGDVVDQFHDKDFYPLQLPRIVLFSPHVDKELKDQLL*

>peptide 3 (50 aa)
MSLPFSASFTKMVISLLPTLAKPPIRAIFNHWSLRRSLKIPISTAVAIGA*

>peptide 4 (53 aa)
MVSARPTYFPGEPVNTSATKKGCDKKRSIFRALATVKRSSSDNSSNPRIAIIS*

>peptide 5 (56 aa)
MCKCCGRGRVGQIVRRYINCLNRSYRPLFGRSNSFLQSTHFCTKGRLITHSRRHSA*

>peptide 6 (71 aa)
MPLQLIRLNPQNQNMVYKQNFLFYWGAPIFYEISFIASTRVLARLTAKFASIVCLLPSARLKLASAISRAF*

Sequence

>CNT30416813
CTAATAAGTTTTTCTACCCACCCTCCCTTTTATTTTAGTTGCATAAGAAATGCCATTACAGTTGATTCGACTCAATCCGCAGAACCAAAATATGGTGTAT
AAACAGAATTTCCTTTTTTATTGGGGCGCACCTATTTTTTATGAAATTTCATTCATAGCCTCTACTCGCGTCCTAGCTCGTCTGACGGCTAAATTCGCTT
CAATTGTTTGTCTCTTGCCCTCAGCCCGACTTAAGTTAGCTTCAGCTATTTCAAGAGCTTTCTGAGCTTCTTGTGGATCAATGTCACTACCCTTCTCCGC
ATCATTTACTAAGATGGTAATCTCATTATTGCCTACTCTAGCAAAACCACCCATCAGAGCGATTTTTAACCATTGGTCATTAAGGCGTAGTCTCAAAATA
CCTATATCTACAGCTGTGGCAATAGGGGCGTGATTTGGTAATACACCGATTTGGCCACTATTAGTAGATAAAACAATTTCTTTCACTTCTGAATCCCAAA
CAATTTGATTCGGGGTTAGTACACAAAGATTTAAGGTCATTTCTTCAATTTGCTCTCCACTTCTATGTTCACAGCCTTCGCGGTAGCTTCGTCGATGTTA
CCTACCAAATAAAAGGCCTGCTCAGGAAGACCATCTAATTCTCCGGAAAGGATCAATTGAAACCCCCTAATGGTTTCTGCTAGACCAACATATTTCCCTG
GAGAGCCCGTAAATACTTCTGCTACGAAGAAGGGTTGTGATAAGAAACGCTCAATTTTTCGTGCTCTTGCTACGGTTAAACGATCCTCTTCAGATAATTC
GTCCAACCCAAGGATAGCTATAATATCCTGAAGTTCTTTGTAACGTTGTGAAGTTTGCTTAACTCTTTGCGCAATTTCATAATGTTCTTCACCAACGATG
CGAGGTTGGAGCATAGTTGACGTACTATCAAGAGGATCTACTGCTGGATAGATACCTTTTGAAGCTAGTCCTCTTGATAATACGGTAGTAGCATCTAAAT
GTGCAAATGTTGTGGCAGGGGCAGGGTCGGTCAAATCGTCCGCAGGTACATAAACTGCTTGAATAGAAGTTATAGACCCCTCTTTGGTAGAAGTAATTCT
TTCTTGCAAAGTACCCATTTCTGTACTAAGGGTAGGTTGATAACCCACAGCAGAAGGCATTCTGCCTAATAAAGCAGATACTTCGGATCCTGCTTGGACA
AATCGGAAAATATTGTCGATAAATAGAAGGACATCTTGTTCATTAACATCTCGGAAATATTCTGCCATGGTTAGGGCAGTCAAACCAACTCTCATACGAG
CTCCCGGCGGTTCATTCATCTGACCATAGACTAGAGCTACTTTTGATTCTGCAAGATTTTGTTCATTAATTACTCCAGACTCTTTCATTTCCATGTAAAG
ATCATTCCCCTCACGAGTACGCTCACCCACTCCGCCAAATACAGATACGCCTCCATGAGCTTTGGCGATGTTGTTGATCAATTCCATGATAAGGATTTTT
ACCCACTCCAGCTCCCCCGAATAGTCCTATTTTCCCCCCACGTCGATAAGGAGCTAAAAGATCAACTACTTTGATCCCTGTTTCAAAAATAGATAATTTT
GTATCTAATTGTATAAAGGCAGGCGCGGATCTATGAATAGGAGATGTTGTGCGAGTATCTACAGGACCTAAATTATCAACAGGCTCTCCAAGAACGTTGA
AAATTCGTCCGAGAGTAGCCCCACCAACCGGAACACTTAGAGCAGCTCCCGTGTCAATAACCTCCATTCCTCTCTTCAGACCATCTGTAGCACTCATAGC
TACAGCTCTCACTCGATATTTCCTAATAATTGCTGTACCTCACAAGTGACATTAATTAGCTCGCCGTCAGTATTTCGGCCCTTAACTACCAAAGCGTTGT
AAATATTAGGCATCTTACCCGGGGGAAAGGATACATCTAGCACCGGACCAATGATTTGAGCGACACGCCCCAGGTTTTTTTCTTCAAGTGCGGAAACCCC
GAGACCCGAAGGGGTAGGATTTGTTTTCATAATAATGATAAAGTGAAATATGTAGAAATTCTTTGCATTTTGTAAACCGAAGAAAAAATGTCCGATAGCA
AGCAGGTTGATCGGTTAATTCAATACAATAATAAATAGGAGTTAGTACTTGATTTCGTTGGTACCATTCAAGCGACTCCAATTCGATTGTTTACTCGTTC
AATGAGTTAATTTTCAAGTTTCACAACCTAAA