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Detailed information on CNT30415826


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3069623Papaver somniferumQuercus suber14.6221.9382100forward

Expression of CNT30415826

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MMGLERFVVTIKSKLKGLKSGSSSKHNYNHKAAASANYYDKIDKSESMRIEISSRKAQKLIQKTLKIADSPINKTHAF*

>peptide 2 (45 aa)
YNHSVKLSWPSLSLGAFFPSLFPTISNLQGLQLFIIIQVFVILLS*

Sequence

>CNT30415826
TATAATCATTCAGTAAAACTTTCTTGGCCATCTCTCTCTCTTGGTGCTTTCTTTCCATCCCTATTCCCTACCATCTCCAACCTTCAGGGTCTCCAACTGT
TTATCATCATTCAGGTTTTTGTAATACTTCTTAGTTAAGATGATGGGATTAGAGAGATTTGTGGTGACAATAAAATCAAAACTGAAAGGATTGAAGTCAG
GATCATCATCAAAGCACAACTACAACCACAAAGCTGCTGCTTCAGCTAATTATTATGATAAGATAGATAAGAGTGAAAGTATGAGGATTGAAATCAGCAG
TAGAAAAGCTCAGAAACTCATTCAGAAAACTCTTAAAATTGCTGATTCACCCATCAACAAAACTCATGCCTTTTAAATTCCATCAGCATACATGAAGGAC
TTGTATTTTGGAATTATCATGCATCACATCATCATCATCATCATGTAATAATAATAATAATTTCTACCTGTGGGATTTTCTATATTTACATGGATGGGGG
TACTTGTTCTTGTTCTTTTTCACTTTTTAGGTAAATTTGTAATCACCAATCAGATATATCGGGTTTTTAGTAGATAATACAAGGATTTTTCCATCTTTAG
GTTCATTTCTTATGGCCTTTCTTATTTAGTTAATCATTTTTAAATTTTTAATAATGGATTTATAACACTTTATATTTGTCATTA