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Detailed information on CNT30415137


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548694Papaver somniferumIpomoea triloba7.125.9991.392forward
CNT30388096Papaver somniferumTriticum turgidum4.8628.7795.2463forward
CNT3016498Papaver somniferumZea mays7.120.3592.3992reverse complement

Expression of CNT30415137

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MAALSRSSPNYNDSSQTTVPTLKDHLVTVVEVYCNCR*

>peptide 2 (50 aa)
MLNTCKLNVAFRELALEKFLCRVPEPKIKLVCVVVLIFSAQNKFVNIFCT*

>peptide 3 (58 aa)
GKTISSSCFLQLFYFFDPPLGVEILPLRIQTTSILVVTPPLIRSTTRNLIIITTADRS*

>peptide 4 (66 aa)
MVKQVIQTKTTIHSACGVQKFSFRSSSYLKFLCRVPKPKMKLGLFHGNQVIQTKTTIHSACRVQPT*

Sequence

>CNT30415137
GGGAAGACTATTTCCTCTTCCTGTTTTCTTCAGTTGTTTTATTTTTTTGATCCACCACTAGGTGTTGAGATTTTACCTCTGCGAATTCAAACGACGTCGA
TACTCGTTGTAACACCACCATTGATTAGATCCACCACCAGAAATCTAATAATAATCACAACAGCAGATCGATCTTGACGATGTTGTTGATGATGATATAT
GAAATTGATTAGACAAATCAGGCATTGAAGTTTATGATTCAATTCGATTGACAGAAGGTTTCTTTTGCCAGAGCTTTAAACTCATCGAAGTTCTTAGTTT
AAATCCAACTTAAACTAGGAGGATTTGATGGTAATAAGAAGAGTTTGAGAAAAGCTCTGATTAAGATTTCGCATGGCAGCACTGTCTAGGTCTTCTCCTA
ACTATAATGATTCTTCCCAAACTACCGTACCGACCCTTAAAGATCACTTGGTAACTGTTGTTGAGGTGTACTGCAACTGCAGATAGCTAATCCATTAATA
ACAAGTCGAGACAAAGGAAGACGTGAACAATCAGCGGGATCTCTAATCAAAAGTCGTTGGTGACTGGTACAGGTGTTATACCTGATTTCTGGTGGAGTCC
CATGTGAAGGCTATACATTGTCCTCATAATCTATGGCCAACATTAGATGACACTAAAGTAGAATTACCATTTACAACCTGAGAGCATGTAACCATTACAG
ATGAAAGGGACTATTCCATGGTAAAACAAGTGATCCAAACAAAGACGACTATTCATTCAGCTTGCGGAGTTCAAAAATTCAGCTTTCGGAGTTCAAGCTA
CTTGAAATTCTTGTGTCGAGTACCAAAACCAAAAATGAAATTGGGACTATTTCATGGTAATCAAGTGATCCAGACAAAGACGACCATTCATTCAGCTTGC
AGAGTTCAACCGACTTGAAATGTTCTACACCACTTCAACCTACAATCATAGTAAAAAACAGAGTTTGATCCTGGCTCAGAACGAACGCTAGCTATATGCT
TAACACATGCAAGTTGAACGTTGCTTTCAGGGAGTTGGCCCTTGAGAAATTCTTGTGTCGAGTACCAGAACCAAAAATAAAATTGGTATGTGTAGTTGTG
TTGATATTTTCTGCACAAAATAAATTTGTGAATATTTTCTGCACATAACAAATCTTGTGGATATTCTCTGCACACATTGAACTGCGGATACATAATGTAC
AAATTATCAGTCTCAATTTGTTGTGAATGAACAACAAATAATCAAACAATTCAAATTAATGAATGGATAAATGGTGAATTCACCTTCTGAATCAAA