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Detailed information on CNT30413510


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMTRT002043, E-value = 2e-125

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200107Papaver somniferumPisum sativum69.0993.3481.98827forward

Expression of CNT30413510

Peptides detected in this lncRNA

>peptide 1 (54 aa)
SKQLSVHSRKAQRKVHTRTPKFFPAFKDWVDIIIHETLNQTLVLTEDKKAANIS*

>peptide 2 (66 aa)
MESRFFLNVVISKSSSIFELFTSKDQSLLIRRNSFLILNLGFNIVDGVRTFDLKSNGLPSKSFHEYL

>peptide 3 (29 aa)
PSNCLFIQEKHNEKYILELPNFFQLLKTG*

>peptide 4 (30 aa)
MVLPVRVFTNICIPPRSRRTRWRVDSFWML*

Sequence

>CNT30413510
TCCAAGCAACTGTCTGTTCATTCAAGAAAAGCACAACGAAAAGTACATACTAGAACTCCCAAATTTTTTCCAGCTTTTAAAGACTGGGTAGATATTATCA
TTCACGAAACTTTAAACCAAACTCTAGTATTGACAGAAGATAAAAAAGCAGCTAACATTTCATAGTTTCAAGACGACAAATAAAAGAACTAGAATAGAAG
ACTGAACAGTGAGACGACAAAGTAAAAATCACATTTCCTTGGCATACTCGACGACCACCTGCAAGCACCAACAACATTTCAATAATCCCCACCACGAAGA
CGCAGGACAAGGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGCAAGAGTTCTTCCGTCTTCCAATTGCTTCCCTGCAAAAATCAATCTCTGCTGGT
CTGGAGGAATCCCTTCCTTATCCTGAATCTTAGCCTTCACATTATCGATTGTGTCAGAACTCTCCACCTCTAAAGTGATCGTCTTTCCTGTCAATGTCTT
AACAAAAATCTGCATTCCTCCCCTAAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAATCAGCGAGCGTACGGCCATCTTCAAGTTGC
TTGCCCGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCCTGAATTTTCGCCTTCACATTATCAATTGTATCAGAGCTTTCTACTTCAA
GGGTAATGGTTTTACCAGTAAGGGTCTTCACAAATATCTGCATACCACCACGGAGTCGAAGGACAAGATGGAGAGTAGACTCTTTCTGGATGTTGTAATC
AGCTAAAGTCCTACCATCTTCGAGCTGTTTACCAGCAAAAATCAATCTCTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATCTTTGCTTTTACATTG
TCAATAGTGTCAGAACTTTCGACCTCAAGAGTAATGGTCTTCCCAGTTAAAGTCTTAACAAAGATCTGCATACCACCACGAAGACGTAGCACGAGATGGA
GAGTAGATTCTTTCTGAATGTTGTAATCAGCAAGAGTTCTTCCATCTTCGAGCTGTTTACCAGCAAAGATCAGTCTCTGTTGATCAGGAGGAATTCCTTC
CTTATCCTGAATCTTGGCTTTAACATTGTCGATGGTGTCAGAACTTTCGACCTCAAGAGTAATGGTCTTCCCAGTAAGAGTTTTCACGAATATCTGC