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Detailed information on CNT30412585


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021612Papaver somniferumCitrullus lanatus4.3336.959275forward
CNT30626155Papaver somniferumDaucus carota4.4533.1992.2177forward

Expression of CNT30412585

Peptides detected in this lncRNA

>peptide 1 (46 aa)
GFSLYASILFLIFFGELFSNQSFSCKIFKDTTPLTISQVPLQQSLS*

>peptide 2 (74 aa)
MGILCFTNCEGVSSSSSTPSTFPFGIQSINSLVHMNNSNMLKLHALELWLGKLIFSKENEESIVGLSPPPPDRF*

Sequence

>CNT30412585
TGGGTTTTCCCTTTATGCCTCTATTCTGTTCTTAATATTTTTTGGTGAACTGTTTTCCAATCAGAGTTTTTCCTGCAAAATTTTCAAAGATACAACTCCC
TTGACGATTTCTCAGGTACCTCTTCAGCAATCACTCTCTTGATTATAGTTTTAGAAGAGAAAATCAAAAGGTCCTTCAGTTTCTTTTTTTGTTAGTATTC
ATCTAGATTTCTATTTCAAACTCTCTTTATGTTATTGAATTAGTAAAATATTTGGAGGAGCCTTTAAAGGATATCCATTAGTGTTGAGTACAGATTAAAT
ACAGTCTGCACTCTCTATAATTAACCCAAGAAAGCTCTCTTTCATTACACTTAGACATCACATAAAAAATATAGAGCTAAATTGAGCCACAACTGCATTA
GTTACTGTTTAGTATAATACTATTGGAAAATTGATGTGAATTTGTATTGCCACTTGTGATCAATTTTGGATTCATCTTCCCCTAAAATTTTGTTTACTGA
GAAAATAGTGACAGTGGTTGGAATGGAAATCAATCTTCAAAGAATGAAATACTTCTTGAACTATTGGGTAGCTCAAGAAAACTGCAGTAGCAGCTGCAAC
AGGAGTTGAATATGCGACAACAATCCAAGGGCGCATACCCAGATGGGGATTTTATGTTTTACTAACTGTGAAGGCGTCTCATCGTCTTCATCAACCCCAT
CGACATTCCCGTTTGGAATCCAATCAATTAACTCACTGGTGCATATGAATAACTCCAACATGCTGAAATTACATGCTTTGGAATTATGGTTAGGTAAACT
GATTTTTTCGAAAGAGAATGAAGAATCAATAGTTGGTCTCTCACCACCACCACCAGACCGGTTTTGATGGGATGTAAGTAAACCCGAACTGTCTCCTTCT
TTATTCCCTTTGGATGCTTCTAAACTACTAGCTTTTATCATTTCCTAAAGACTAGATGGTGGTGTCACAAAGCTCTATCTTCTTATAAGTTTTTAAGCCA
GGGATAGTCAGTTTTCGCTTCTTTGTAAAGCCAATTTCACTTCAAATTCGAGGAGGAGGGCATGCCTGATACTGGAGTATTTTAATCTTATTTATTTTCA
GTCGGGAAACTAAATTTGTCCAGCCAGAACAATTGCTGCTCAAGATTTTGCATCAGATGATTCGGGTGTGCGGCCTGTCGGATGATGAAGGCGAAGTCTT
GGTTGCAAACTGGATGACAGAGCTCTAAAGCGTAAGGGTCCGAAATGCTTTTCAATACCGGGAAACTACGTCACAGGACGGGAGCGTCAGTACCCGACGA
GGGAAAATACCTAATTTATTTACAGCTGTAGGTATATGATCCTAATCAGGCCCTGGACTTTCGTGCGAAACGAAATCCCCAGCTGAAGAGATGCTATTTC
CTCTTCTCCTTTGTCTCTGAAAGTTTAAGATGTCGGCAGATCGTTGGAGTGCGAAGTTCAGTGAATGATAGCCAGTCTAATTTCTTATTAACATCAGGTT
GCTTCAAATAGAACTTACTGCACCAACTAAAGTGGCGAGCCACTGAAATCCTACAAATTCTGCTAGACTGCGGAGGTTCCTAGCAGTTTCTACGACATCA
GGCTTGGGGATTTGAATAAGATAGAAAGCTGAAGACATCAATGGGGACAAACTTCTCATGCATAACCAAGATGGTGTGGAAAAACTATAAACTTTTGTAA
CATTTTGGGATAGTGTTTTTGTCTAAAAAAAC