« Back to Papaver somniferum search


Detailed information on CNT30412183


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677083Papaver somniferumSetaria viridis14.9558.892.16421forward
CNT30524664Papaver somniferumSetaria italica32.5366.9194.98916forward
CNT30378667Papaver somniferumArabidopsis thaliana10.2325.7496.88288forward
CNT30616920Papaver somniferumSesamum indicum18.6153.6390.08524reverse complement
CNT30711335Papaver somniferumGlycine max13.1794.6494.88371reverse complement
CNT3044711Papaver somniferumPrunus dulcis16.9410098.95477reverse complement
CNT30638683Papaver somniferumCapsicum annuum18.2999.8193.79515reverse complement
CNT3088853Papaver somniferumVigna radiata9.4865.9397.38267reverse complement
CNT30554009Papaver somniferumOryza glaberrima11.8661.2894.01334forward
CNT30248027Papaver somniferumAvena sativa33.2496.193.8936reverse complement
CNT30664460Papaver somniferumTriticum dicoccoides12.8299.7296.12361forward
CNT3062651Papaver somniferumArabidopsis lyrata24.2982.2197.81684reverse complement
CNT30126841Papaver somniferumCorymbia citriodora12.2592.7495.36345forward
CNT30357533Papaver somniferumLactuca sativa15.0241.5597.64423forward
CNT30646402Papaver somniferumCannabis sativa35.979.9293.081011reverse complement
CNT3056240Papaver somniferumAmborella trichopoda8.8887.4198.4250forward
CNT30576679Papaver somniferumOryza barthii11.8663.6294.91334forward
CNT3039583Papaver somniferumMarchantia polymorpha14.0697.7891.16396reverse complement

Expression of CNT30412183

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MPLEPRASWFSPKCVEAQQSTRHLGVKHCFGAGRXXXXRLNTPG*

>peptide 2 (48 aa)
MVIGSRTQGSSTEGESGPKIRPKGVVDGQQVNIPVLPLVGPEGRRRLG*

>peptide 3 (53 aa)
MGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 4 (60 aa)
MVIGSRTQGDLRVRRGRENASSQCPSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTGG*

>peptide 5 (66 aa)
MGRHPETRKGVASDEMLRGVENKHISGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP*

>peptide 6 (68 aa)
MNGAKRSAEAVGCKNASVGERSALEGSIRASRCGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGG*

>peptide 7 (77 aa)
MPLEPRASWFSPKCVEAQQSTRHLGVKHCFGAGRESGTKSRQTLNTRYDPKIWGQGRPVRRWGISFIVERETARITS*

>peptide 8 (79 aa)
KILPFSSTLGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGQPFELLLNPWAGTQRRGRA*

>peptide 9 (81 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEAVECCTLDGESPVAESITSLCSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP*

Sequence

>CNT30412183
TAAGATACTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAACGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCA
GAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACCTTTCGAACTGCTGC
TGAATCCATGGGCAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATATATCCGGAGATTCCCGAATA
GGTCAACCTTTCGAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGAT
TCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAG
TGCTGCACCCTAGATGGTGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTATGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGC
AAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGCGGTGGAGTGCTGCACCCTAGATGGTGAGAGTCCAGTAGCCGAAAGCATCAC
TAGCTTATGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGC
GAAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCATGCAGTGGGAGGAGCCTGGGCTCT
GACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCAA
TTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAA
TCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTCGACTAGACATCT
AGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGANNNNNNNNNNAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAGGGTGAAA
AGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCTGGGCTCTGACCGCGTGCCTGTTGAAGAATGAGCCG
GCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGG
GTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGAGTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGA
AATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTCGACTAGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGC
CGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCCAAAATATGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCA
TCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCT
AGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATG
TAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCATCCGCGCGAGCAGGTGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCA
AACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTA
GTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACG
CAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGTGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTC
CCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGACCTTAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCC
AATGTCCGAGTACCAGGCGCTACGGCGCTGAAGTAACTCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAAC
CGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTC
CTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCC
CAGTGCCGGAAGGTCA