Detailed information on CNT30412115


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730500Papaver somniferumCorchorus capsularis34.8598.8297.271173reverse complement

Expression of CNT30412115

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MFQFARLSLACPWIQQQFERLSLACPWIQQQFERLTYSGISGSMLIFNSPKHFVACYALPRLWVPRYPP*

>peptide 2 (75 aa)
MSRRLILQQAREPRLLPLLGSLRFHVLFHSPMGVLFTLPSRYYFAIGHPGVFSLARWSLLIHTGFHVPHATRVRA*

>peptide 3 (89 aa)
DPLCEEAPLLPKLRGYFAEFLRESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGMSYFSAVAPGTRTLARGIFSTPSYPKVTLRP*

>peptide 4 (81 aa)
MGVLFTLPSRYYFAIGHPGVFSXXXXSRPAPKQCFTPRCLVDCCASTHFGENQLALGSSGISPLTTTHPLILQHQSVRTST*

>peptide 5 (54 aa)
MSSRLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSLGSDLHLVSPKLHPGHG*

>peptide 6 (54 aa)
MSSRLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLVSPKLHPGHG*

>peptide 7 (56 aa)
MFALLKPTFSLPLRPHLLARVLPSKAERSPTDAFLHPTASADRLAPFIFGARALDQ*

>peptide 8 (56 aa)
MFALLKPTFSLPLRPHLLARMLPSKAERSPTDAFLHPTASADRLAPFIFGARALDQ*

>peptide 9 (58 aa)
MINHRSNCRIGKIGCYHIPLYPLSSRAGDKRTRTADIRHRVNHRLSGLPDRFYHRGQR*

>peptide 10 (29 aa)
MDRSPRFGSISSDNCPMKTRFRYGSGGFP*

>peptide 11 (29 aa)
MDRSPRFGSISSDNCPMKTRFRYGSGGFP*

>peptide 12 (35 aa)
MFYFTPRWGFFSPFPHGTTSLSVTQEYLALQGGPC*

>peptide 13 (31 aa)
MSYFSAVAPGTRTLARGIFSTPSYPKVTLRP*

>peptide 14 (53 aa)
MDSAAVRKVVSCLPMDSAAVRKVDLFGNLRIYAYFQLPEAFRRLLRPSSSLGA*

>peptide 15 (45 aa)
MLLGSEHKLVMLSATGLSPSRVQHSTASPSSTTLVLLSHNPVFTV*

>peptide 16 (72 aa)
MSRRLILQQARGQSPGSSHCLGAYGFMFYFTPRWGFFSPFPHGTTSLSVTQEYLAXXXXRGPHRNSALPLDV*

Sequence

>CNT30412115
CGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTAC
CTACCCACCTGTGTCGGTTTCGGGTACAGGTACCCTTTTGTTGAAGGTCGTTCGAGCTTTTCCTGGGAGTATGGCATGAGTTACTTCAGCGCCGTAGCGC
CTGGTACTCGGACATTGGCTCGAGGCATTTTCTCTACCCCTTCTTACCCTAAGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGC
CTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACACCTTTCGGCCTGATCTTAGGCCCTGACTCACCCT
CCGTGGACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTC
CACACCTGCTCGCGCGGGTGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCAT
CTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCT
TTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGA
CCCCATATTTTGGGGTCATATCTANNNNNNNNNNCGAGCTTTTCCTGGGAGTATGGCATGAGTTACTTCAGCGCCGTAGCGCCTGGTACTCGGACATTGG
CTCGAGGCATTTTCTCTACCCCTTCTTACCCTAAGGTCACCTTGCGTCCTTGAACCGATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGA
CCAACAAGGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG
GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACACCTGCTCGCGCGGA
TGCTTCCCTCTAAGGCGGAACGCTCCCCTACCGATGCATTTTTACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCT
CGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAGCGGTCAT
TTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCCATATTTTGGGGTCA
TATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCTAGTCGACTGCTGCGCCTCAA
CGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCACTCGGTTCGGACCTC
CACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTCGCTAC
GGCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCAGGCTCCTCCCACTGCTTGGG
AGCTTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCC
TNNNNNNNNNNTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATGTCTAGTCGACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCT
GGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCTG
GTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCCTTAACCAAGCC
ACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGAGCCCAGGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCG
ATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGAT
TCCACGTGCCCCATGCTACTCGGGTCAGAGCATAAGCTAGTGATGCTTTCGGCTACTGGACTCTCACCATCTAGGGTGCAGCACTCCACCGCTTCGCCTA
GCAGCACGACGCTTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTTTGCTTTCTT
TTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGCAGTTCGAAAGGTTGTCTCTTGCCTGCCCATGGAT
TCAGCAGCAGTTCGAAAGGTTGACCTATTCGGGAATCTCCGGATCTATGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTGCTACGCCCTTCCTCGT
CTCTGGGTGCCTAGGTATCCACCGTAAGCCTTTCCTCGTTTGAACCTCGCCGTTAACTTTAAGGCTATGCCATCCTAAGGTGCTGCTAAATGGAAGTATC
TTATCAACGTCCATGAATGATAAACCATAGATCGAACTGCCGAATCGGAAAAATTGGGTGCTATCATATACCTTTGTATCCGCTAAGTTCACGAGCTGGA
GATAAGCGGACTCGAACCGCTGACATCCGCCACAGGGTAAACCACCGCCTCTCAGGCCTCCCCGATCGATTCTACCATAGAGGCCAACGATAGACAATAA
CTCCCCCCCGAACACAGCTTACAACTTTCATCGTACTGTGCTCTCCAAAGAGCAACTCTTCTCAAAATCTCAAAAGGTGCTGAGTTGGAATCCCATTCTA
AGGATTCTTGCGGTTCCGGAGAATCCAGCTACAGGAGAACCAGGAACGGAGAGCTTTCCCCCCCCT