Detailed information on CNT30412011


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30588765Papaver somniferumMusa acuminata22.0585.2496.47595reverse complement
CNT30442428Papaver somniferumAegilops tauschii29.0210094.25783forward

Expression of CNT30412011

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 2 (31 aa)
GGGKLSVPGSPVAGFSGTARILRMGFQLSTF*

>peptide 3 (30 aa)
MIAPNFSDSAVRSMVYHSWTLIRYFHLAAP*

>peptide 4 (98 aa)
MDVDKILPFSSTLGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP*

>peptide 5 (77 aa)
MPLEPRASWFSPKCVEAQQSTRHLGVKHCFGAGRESGTKSRQTLNTRYDPKIWGQGRPVRRWGISFIVERETARITS*

>peptide 6 (68 aa)
MNGAKRSAEAVGCKNASVGERSALEGSTRASRCGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGG*

>peptide 7 (60 aa)
MVIGSRTQGDLRVRRGRENASSQCPSTRRYGAEVTHAILPGKARTTFNKRVPVPETDTGG*

>peptide 8 (53 aa)
MGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 9 (33 aa)
MNGAKRSAEAVGCKNASVGVQRQPGGLPRSSHP*

Sequence

>CNT30412011
AGGGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCGCAAGAATCCTTAGAATGGGATTCCAACTCAGCACCTTTTGAGAT
TTTGAGAAGAGTTGCTCTTTGGAGAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCG
ATCGGGGAGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAGCTCGTGAACTTAGCGGATACAAAGGTATA
TGATAGCACCCAATTTTTCCGATTCGGCAGTTCGATCTATGGTTTATCATTCATGGACGTTGATAAGATACTTCCATTTAGCAGCACCTTAGGATGGCAT
AGCCTTAAAGTTAACGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTC
GGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACCTTTCGAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACT
GAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGCAAGAGA
CAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAA
AACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGTGAGAGTCCAGTAGCCGAAAGCATCACT
AGCTTATGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCG
AAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCATGGGAGGAGCCTGGGCTCTGA
CCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT
GTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC
AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTCGACTAGACATCTAG
GGGTAAAGCACTGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGAGTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCA
CTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTCGACTAGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGA
GCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCCAAAATATGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGA
GAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCA
GCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAAT
GCATCGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAA
GATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACCCGCGCGAGCAGGTGT
GGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACG
GAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGTGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACGGAGGA
GGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGACCTTAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCAATGTCCGAGTACCA
GGCGCTACGGCGCTGAAGTAACTCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTA
GGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGGGGTC
GCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGG