Detailed information on CNT30411976


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536068Papaver somniferumEucalyptus grandis68.4543.3595.451493reverse complement
CNT30513456Papaver somniferumJuglans regia68.5547.196.391495forward
CNT30269781Papaver somniferumChenopodium quinoa68.2750.3995.031489forward
CNT30630109Papaver somniferumVigna unguiculata68.9647.7295.211504forward
CNT30722943Papaver somniferumTriticum spelta53.5157.9794.341167forward
CNT30319706Papaver somniferumAsparagus officinalis68.3651.8897.521491forward

Expression of CNT30411976

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MNGAKRSAEAVGCKNASVGERSALEGSIRASRCGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGG*

>peptide 2 (77 aa)
MPLEPRASWFSPKCVEAQQSTRHLGVKHCFGAGRESGTKSRQTLNTRYDPKIWGQGRPVRRWGISFIVERETARITS*

>peptide 3 (54 aa)
MPRANVRVPGATALNNSCHTPRKSSNDLQQKGTCTRNRHRWVGREYLGARDNSL*

>peptide 4 (59 aa)
LGWHSLKVNGEVQTRKGLRWIPRHPETRKGVASDEMLRGVENKHRSGDSRIGTQRRGRA*

>peptide 5 (53 aa)
MGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 6 (51 aa)
MLRGVENKHISGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP*

>peptide 7 (33 aa)
MVIGSRTQGDLRVRRGRENASSQCPSTRRYGAE*

>peptide 8 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 9 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

Sequence

>CNT30411976
TTAGGATGGCATAGCCTTAAAGTTAACGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCG
ACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGG
GGAGTTGAAAATAAGCATATATCCGGAGATTCCCGAATAGGTCAACCTTTCGAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGA
AACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAG
AGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGTGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTATGCTCTGACC
CGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGG
GAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCTGGGCTCTGACCGCGTGCCNNNNNN
NNNNTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGTGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTA
TGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAG
TACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGATGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCTGGGCTCTGACCGCGT
GCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATTGTCACT
GCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGAGTGATGTTGAAGAATCAGCGGA
TGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTCGACTAGACATCTAGGGGTAA
AGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCCAAAATATGGGGTCAAGGTCGGCCAGTGAG
ACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGA
GACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGA
TCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCATCCGCGCGAGCAGGTGTGGACGAAGCGGAAGCGAGA
ATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTA
AGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGA
TGGTTATCGGTTCAAGGACGCAAGGTGACCTTAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCAATGTCCGAGTACCAGGCGCTACGGCGCTGAATA
ACTCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGC
GCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCG